RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 C19orf12Q9NSK7 152 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 KLK11Q9UBX7 282 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 CR1P17927 2039 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 KIAA1324LA8MWY0 1029 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 CTDSPLO15194 276 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 CD3GP09693 182 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 RCC1P18754 421 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 PTBP1P26599 531 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 P2RX3P56373 397 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 GNB2P62879 340 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 PITPNAQ00169 270 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 BTN2A1Q7KYR7 527 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 MAPK1IP1LQ8NDC0 245 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 C12orf4Q9NQ89 552 aa18.03■□□□□ 0.48
PDLIM3-203ENST00000284771 MEIKINA0A087WXM9 373 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 ODAMA1E959 279 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 LANCL1O43813 399 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 FCER2P06734 321 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 NPY4RP50391 375 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 OR13A1Q8NGR1 328 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 S100ZQ8WXG8 99 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 MAFIPQ8WZ33 124 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 H1FXQ92522 213 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 RABL2AQ9UBK7 228 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 RABL2BQ9UNT1 228 aa18.02■□□□□ 0.47
PDLIM3-203ENST00000284771 IGKV1D-8A0A087WSZ0 117 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 TMEM30CPA0ZSE6 113 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 C22orf46C9J442 243 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 FCGR3AP08637 254 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 ESCO2Q56NI9 601 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 PYDC2Q56P42 97 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 ZNF880Q6PDB4 577 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 TRAPPC6BQ86SZ2 158 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 C15orf40Q8WUR7 153 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 SMIM4Q8WVI0 70 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 OCSTAMPQ9BR26 566 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 ITGB1BP2Q9UKP3 347 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 ZANQ9Y493 2812 aa18.01■□□□□ 0.47
PDLIM3-203ENST00000284771 WNK2Q9Y3S1 2297 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 TRBV6-6A0A0A6YYG2 114 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 CYSRT1A8MQ03 144 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 GABARAPH6UMI1 98 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 GPR37O15354 613 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 RPL31P62899 125 aaKnown RBP18■□□□□ 0.47
PDLIM3-203ENST00000284771 LOXL1Q08397 574 aaPredicted RBP18■□□□□ 0.47
PDLIM3-203ENST00000284771 BAK1Q16611 211 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 TMEM200BQ69YZ2 307 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 Q8N402 240 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 RAB39BQ96DA2 213 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 TSC22D3Q99576 134 aa18■□□□□ 0.47
PDLIM3-203ENST00000284771 MBNL3Q9NUK0 354 aaKnown RBP18■□□□□ 0.47
PDLIM3-203ENST00000284771 J3QRK9 145 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 LPLP06858 475 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 ZNF273Q14593 569 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CIARTQ8N365 385 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 FCAMRQ8WWV6 532 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 ST6GALNAC5Q9BVH7 336 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 RIMS4Q9H426 269 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 NCOR1P1Q9H4R4 102 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 SCPEP1Q9HB40 452 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CHMP1AQ9HD42 196 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 Q9N2K0 584 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 RPUSD1Q9UJJ7 312 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 TRAPPC2LQ9UL33 140 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CREBBPQ92793 2442 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 A8MXK9 166 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 SULT1C2O00338 296 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 GSTZ1O43708 216 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 ORC5O43913 435 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CGB3P0DN86 165 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CGB7P0DN87 165 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 PPP5CP53041 499 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 LCN2P80188 198 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 MRPS15P82914 257 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 PAX2Q02962 417 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 CR1LQ2VPA4 569 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 MRGPRDQ8TDS7 321 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 DACT3Q96B18 629 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 MTFP1Q9UDX5 166 aa17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 RBMX2Q9Y388 322 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-203ENST00000284771 OTOGQ6ZRI0 2925 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 DTYMKP23919 212 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 MRPS10P82664 201 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 LY6G5BQ8NDX9 201 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 SNAPC3Q92966 411 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 THAP7Q9BT49 309 aaPredicted RBP17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 MMP26Q9NRE1 261 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 ANAPC10Q9UM13 185 aa17.98■□□□□ 0.47
PDLIM3-203ENST00000284771 CELSR1Q9NYQ6 3014 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 H7C1Q1 480 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 ERVFRD-1P60508 538 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 MEF2CQ06413 473 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 ZNF846Q147U1 533 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 OR52W1Q6IF63 320 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 LYSMD2Q8IV50 215 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 GDPD1Q8N9F7 314 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 C8orf46Q8TAG6 207 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 SETD6Q8TBK2 473 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 CORO2AQ92828 525 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 TRIM63Q969Q1 353 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms