RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 DUX4L3P0CJ86 424 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 DUX4L4P0CJ87 422 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 DUX4L5P0CJ88 424 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 DUX4L6P0CJ89 424 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 DUX4L7P0CJ90 424 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 IGKV1-13P0DP09 117 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 HKR1P10072 659 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 GLI4P10075 376 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 BAP18Q8IXM2 172 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 GAPTQ8N292 157 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 ZNF565Q8N9K5 539 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 SECTM1Q8WVN6 248 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 CABLES2Q9BTV7 478 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 DUX4Q9UBX2 424 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 TINAGQ9UJW2 476 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 FBXO9Q9UK97 447 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-201ENST00000272930 AMDHD2Q9Y303 409 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 FAM215AQ9Y5M1 114 aa17.13■□□□□ 0.33
UBE2F-201ENST00000272930 A8MXK9 166 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 CRYABP02511 175 aaKnown RBP17.12■□□□□ 0.33
UBE2F-201ENST00000272930 RCC1P18754 421 aaPredicted RBP17.12■□□□□ 0.33
UBE2F-201ENST00000272930 SRPXP78539 464 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 EIF2S3LQ2VIR3 472 aaKnown RBP17.12■□□□□ 0.33
UBE2F-201ENST00000272930 ZNF818PQ6ZRF7 136 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 FOXRED2Q8IWF2 684 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 TMEM222Q9H0R3 208 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 HES4Q9HCC6 221 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 TMED3Q9Y3Q3 217 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
UBE2F-201ENST00000272930 IGHV2OR16-5A0A0B4J2B6 119 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.11■□□□□ 0.33
UBE2F-201ENST00000272930 NXPH2O95156 264 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 SMCO1Q147U7 214 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 SPIN3Q5JUX0 258 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 MOB1BQ7L9L4 216 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 ASCL5Q7RTU5 278 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 TBC1D26Q86UD7 250 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 C1orf174Q8IYL3 243 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 DNTTIP1Q9H147 329 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 SESN1Q9Y6P5 492 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 GRPP07492 148 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 ZNF497Q6ZNH5 498 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 PLPPR1Q8TBJ4 325 aa17.11■□□□□ 0.33
UBE2F-201ENST00000272930 C1QTNF9BB2RNN3 333 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 NPIPB11E5RHQ5 1161 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 SIRPB1O00241 398 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 TAAR5O14804 337 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 MBPP02686 304 aaPredicted RBP17.1■□□□□ 0.33
UBE2F-201ENST00000272930 C1orf185Q5T7R7 199 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 MBNL2Q5VZF2 373 aaKnown RBP17.1■□□□□ 0.33
UBE2F-201ENST00000272930 ZNF324BQ6AW86 544 aaPredicted RBP17.1■□□□□ 0.33
UBE2F-201ENST00000272930 C11orf53Q8IXP5 236 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 SLC35G3Q8N808 338 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 BVESQ8NE79 360 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 TMEM56Q96MV1 263 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 TLNRD1Q9H1K6 362 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 CXXC4Q9H2H0 198 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 TMEM56-RWDD3S4R434 201 aa17.1■□□□□ 0.33
UBE2F-201ENST00000272930 DSPP15924 2871 aaKnown RBP17.1■□□□□ 0.33
UBE2F-201ENST00000272930 K7EPK0 472 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 SH2D1BO14796 132 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 ZP3P21754 424 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 TIMP3P35625 211 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 ZNF718Q3SXZ3 478 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 H1FOOQ8IZA3 346 aaPredicted RBP17.09■□□□□ 0.33
UBE2F-201ENST00000272930 FAM71E2Q8N5Q1 922 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 LRRC20Q8TCA0 184 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 USB1Q9BQ65 265 aaKnown RBP17.09■□□□□ 0.33
UBE2F-201ENST00000272930 ZFP57Q9NU63 452 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 OR2W1Q9Y3N9 320 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 LSM5Q9Y4Y9 91 aaKnown RBP17.09■□□□□ 0.33
UBE2F-201ENST00000272930 A0A1B0GWJ7 208 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 PROB1E7EW31 1015 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 FGF16O43320 207 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 RPL12P30050 165 aaKnown RBP17.09■□□□□ 0.33
UBE2F-201ENST00000272930 TMEM268Q5VZI3 342 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 Q6ZR03 302 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 OR10J5Q8NHC4 309 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 CCL28Q9NRJ3 127 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 BOD1L1Q8NFC6 3051 aa17.09■□□□□ 0.33
UBE2F-201ENST00000272930 IGHV3-64DA0A0J9YX35 117 aa17.08■□□□□ 0.33
UBE2F-201ENST00000272930 TIMM8AO60220 97 aaPredicted RBP17.08■□□□□ 0.33
UBE2F-201ENST00000272930 MEX3BQ6ZN04 569 aaKnown RBP17.08■□□□□ 0.33
UBE2F-201ENST00000272930 RPRMLQ8N4K4 120 aa17.08■□□□□ 0.33
UBE2F-201ENST00000272930 KIRREL1Q96J84 757 aa17.08■□□□□ 0.33
UBE2F-201ENST00000272930 PLEKHA2Q9HB19 425 aa17.08■□□□□ 0.33
UBE2F-201ENST00000272930 E5RGE8 158 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 TEX46H3BTG2 121 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 SCGB1D2O95969 90 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 GCH1P30793 250 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 KRTCAP3Q53RY4 240 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 ZNF474Q6S9Z5 364 aaPredicted RBP17.08■□□□□ 0.32
UBE2F-201ENST00000272930 FIP1L1Q6UN15 594 aaKnown RBP17.08■□□□□ 0.32
UBE2F-201ENST00000272930 SPERTQ8NA61 448 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 OR52M1Q8NGK5 317 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 MBNL3Q9NUK0 354 aaKnown RBP17.08■□□□□ 0.32
UBE2F-201ENST00000272930 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 NSG2Q9Y328 171 aa17.08■□□□□ 0.32
UBE2F-201ENST00000272930 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms