RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 ST3GAL6Q9Y274 331 aa7.48□□□□□ -1.21
TRIM43-201ENST00000272395 STARD10Q9Y365 291 aa7.48□□□□□ -1.21
TRIM43-201ENST00000272395 PIGBOS1A0A0B4J2F0 54 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 IGKV1-12A0A0C4DH73 117 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 GEMIN2O14893 280 aaKnown RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SIGLEC5O15389 551 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ST8SIA3O43173 380 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 CDS2O95674 445 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 IGKV1D-12P01611 117 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 MBPP02686 304 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 MMP7P09237 267 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 COX5BP10606 129 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 NTF4P34130 210 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 OPRM1P35372 400 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 UCP2P55851 309 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ZNF92Q03936 586 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 PLCXD3Q63HM9 321 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SLC22A25Q6T423 547 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ALKBH3Q96Q83 286 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 GINS3Q9BRX5 216 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ERRFI1Q9UJM3 462 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 STRAPQ9Y3F4 350 aaKnown RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ZNF175Q9Y473 711 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 KPTNQ9Y664 436 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 DUXBA0A1W2PPF3 345 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 AHRRA9YTQ3 701 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 WDR1O75083 606 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SFTA3P0C7M3 94 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 RNF224P0DH78 156 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 GLI4P10075 376 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 RCC1P18754 421 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 RND3P61587 244 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 PIGYQ3MUY2 71 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 Q6ZRG5 221 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 C9orf106Q8NAJ2 232 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 GLYATL2Q8WU03 294 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 PIGCQ92535 297 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 TOMM40LQ969M1 308 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 MSI2Q96DH6 328 aaKnown RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SPIN2AQ99865 258 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 SPIN2BQ9BPZ2 258 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 OPA3Q9H6K4 179 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 CLCF1Q9UBD9 225 aa7.47□□□□□ -1.21
TRIM43-201ENST00000272395 UBR5O95071 2799 aaPredicted RBP7.47□□□□□ -1.21
TRIM43-201ENST00000272395 ZNF407Q9C0G0 2248 aa7.46□□□□□ -1.21
TRIM43-201ENST00000272395 PQLC2LA1A4F0 135 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 SLC22A20A6NK97 555 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 RPL36A-HNRNPH2H7BZ11 118 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 TSPAN15O95858 294 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 CTXN2P0C2S0 81 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 DANCRP0C864 163 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 SPP1P10451 314 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 NPBWR1P48145 328 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 HOXA1P49639 335 aaPredicted RBP7.46□□□□□ -1.22
TRIM43-201ENST00000272395 ADORA2A-AS1P86434 159 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 PEA15Q15121 130 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 MPV17LQ2QL34 196 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 TMEM88Q6PEY1 159 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 FBXW12Q6X9E4 464 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.46□□□□□ -1.22
TRIM43-201ENST00000272395 GCNT2Q8N0V5 402 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 ZNF611Q8N823 705 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 NAXEQ8NCW5 288 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 GTF3AQ92664 365 aaKnown RBP7.46□□□□□ -1.22
TRIM43-201ENST00000272395 MARS2Q96GW9 593 aaKnown RBP7.46□□□□□ -1.22
TRIM43-201ENST00000272395 KIRREL1Q96J84 757 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 ZNF442Q9H7R0 627 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 RNF122Q9H9V4 155 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 ARHGAP21Q5T5U3 1957 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 SVILO95425 2214 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 TENM4Q6N022 2769 aa7.46□□□□□ -1.22
TRIM43-201ENST00000272395 A0A0G2JNJ9 132 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 A0A1B0GW64 132 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 FAM157AC9JC47 383 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 MPPED1O15442 326 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 ZG16O60844 167 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 MRPL33O75394 65 aaKnown RBP7.45□□□□□ -1.22
TRIM43-201ENST00000272395 SYNGR4O95473 234 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 DIRAS3O95661 229 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 SCGB1D2O95969 90 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 PPYP01298 95 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 TK1P04183 234 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 PATE4P0C8F1 98 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 FOLR2P14207 255 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 MMP9P14780 707 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 AADACP22760 399 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 FXYD4P59646 89 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 GNMTQ14749 295 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 PHLDA2Q53GA4 152 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 P4HA3Q7Z4N8 544 aa7.45□□□□□ -1.22
TRIM43-201ENST00000272395 LYZL2Q7Z4W2 148 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms