RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ZNF880Q6PDB4 577 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 ZNF818PQ6ZRF7 136 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 BEND4Q6ZU67 534 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 FOXRED2Q8IWF2 684 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 PLK3Q9H4B4 646 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 C1orf123Q9NWV4 160 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 TRDCB7Z8K6 153 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 MKRN2OSH3BPM6 223 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 UCP3P55916 312 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 OR1S1Q8NH92 325 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 FAM57AQ8TBR7 257 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 GALNT14Q96FL9 552 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 UFSP2Q9NUQ7 469 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 TMEM100Q9NV29 134 aa19.57■□□□□ 0.72
RAB40B-201ENST00000269347 PRSS44E7EML9 344 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 GLP1RP43220 463 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 NAAAQ02083 359 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 FAM27E3Q08E93 113 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 ABCA11PQ4W5N1 156 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 UNQ6126/PRO20091Q6UXV3 157 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 SECTM1Q8WVN6 248 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 PIK3IP1Q96FE7 263 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 IFT22Q9H7X7 185 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 CACNA1DQ01668 2161 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 PSPNO60542 156 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 TUSC2O75896 110 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 CRYABP02511 175 aaKnown RBP19.56■□□□□ 0.72
RAB40B-201ENST00000269347 CEACAM8P31997 349 aaPredicted RBP19.56■□□□□ 0.72
RAB40B-201ENST00000269347 SRSF7Q16629 238 aaKnown RBP eCLIP19.56■□□□□ 0.72
RAB40B-201ENST00000269347 TBR1Q16650 682 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 IAH1Q2TAA2 248 aaPredicted RBP19.56■□□□□ 0.72
RAB40B-201ENST00000269347 LINC00596Q86U02 117 aa19.56■□□□□ 0.72
RAB40B-201ENST00000269347 NXPH2O95156 264 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 LYL1P12980 280 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 M6PRP20645 277 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 KITLGP21583 273 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 TIMP3P35625 211 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 HERV-K104P61576 105 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 FAM53AQ6NSI3 398 aaPredicted RBP19.55■□□□□ 0.72
RAB40B-201ENST00000269347 SLC38A6Q8IZM9 456 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 INO80EQ8NBZ0 244 aaPredicted RBP19.55■□□□□ 0.72
RAB40B-201ENST00000269347 USB1Q9BQ65 265 aaKnown RBP19.55■□□□□ 0.72
RAB40B-201ENST00000269347 SLC25A32Q9H2D1 315 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 HES4Q9HCC6 221 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 CCL28Q9NRJ3 127 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 OR1A1Q9P1Q5 309 aa19.55■□□□□ 0.72
RAB40B-201ENST00000269347 TIMM8AO60220 97 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-201ENST00000269347 SLC34A2O95436 690 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 ZP3P21754 424 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 PRSS54Q6PEW0 395 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 KIRREL1Q96J84 757 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 C18orf12Q96KH6 178 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 ZNF471Q9BX82 626 aaPredicted RBP19.54■□□□□ 0.72
RAB40B-201ENST00000269347 PARP12Q9H0J9 701 aaKnown RBP19.54■□□□□ 0.72
RAB40B-201ENST00000269347 CYTL1Q9NRR1 136 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 OR14J1Q9UGF5 321 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 METRNQ9UJH8 293 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 C1QTNF9BB2RNN3 333 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 M0R1B8 84 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 S100A10P60903 97 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 NHLH1Q02575 133 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 ZNF146Q15072 292 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 PAN3Q58A45 887 aaKnown RBP19.54■□□□□ 0.72
RAB40B-201ENST00000269347 DOLPP1Q86YN1 238 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 GAPTQ8N292 157 aa19.54■□□□□ 0.72
RAB40B-201ENST00000269347 TRBV6-6A0A0A6YYG2 114 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 PHF1O43189 567 aaPredicted RBP19.53■□□□□ 0.72
RAB40B-201ENST00000269347 BMP5P22003 454 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 CCKARP32238 428 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 CYCSP99999 105 aaKnown RBP19.53■□□□□ 0.72
RAB40B-201ENST00000269347 FAM180AQ6UWF9 173 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 WDR82Q6UXN9 313 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 LINC00052Q96N35 136 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 SPACA1Q9HBV2 294 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 HSD17B6O14756 317 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 LIAT1Q6ZQX7 453 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 POLDIP2Q9Y2S7 368 aa19.53■□□□□ 0.72
RAB40B-201ENST00000269347 MPPED1O15442 326 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 MBNL2Q5VZF2 373 aaKnown RBP19.52■□□□□ 0.72
RAB40B-201ENST00000269347 ZNF497Q6ZNH5 498 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 TBC1D26Q86UD7 250 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 PRR18Q8N4B5 295 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 OR52M1Q8NGK5 317 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 BCL2L14Q9BZR8 327 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 SH3BGRL2Q9UJC5 107 aa19.52■□□□□ 0.72
RAB40B-201ENST00000269347 A0A1B0GW55 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 B8ZZF3 427 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 TPD52L2O43399 206 aaKnown RBP19.51■□□□□ 0.71
RAB40B-201ENST00000269347 TNFSF12O43508 249 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 TK1P04183 234 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L2P0CJ85 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L3P0CJ86 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L4P0CJ87 422 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L5P0CJ88 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L6P0CJ89 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4L7P0CJ90 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 NUP62P37198 522 aaPredicted RBP19.51■□□□□ 0.71
RAB40B-201ENST00000269347 HLA-DRB3P79483 266 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 DUX4Q9UBX2 424 aa19.51■□□□□ 0.71
RAB40B-201ENST00000269347 AMDHD2Q9Y303 409 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms