RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 RND3P61587 244 aa18.26■□□□□ 0.51
CBLN3-201ENST00000267406 SRPXP78539 464 aa18.26■□□□□ 0.51
CBLN3-201ENST00000267406 TMEM56Q96MV1 263 aa18.26■□□□□ 0.51
CBLN3-201ENST00000267406 PARP11Q9NR21 331 aa18.26■□□□□ 0.51
CBLN3-201ENST00000267406 CARHSP1Q9Y2V2 147 aaKnown RBP18.26■□□□□ 0.51
CBLN3-201ENST00000267406 TMEM56-RWDD3S4R434 201 aa18.26■□□□□ 0.51
CBLN3-201ENST00000267406 TBC1D28Q2M2D7 210 aa18.25■□□□□ 0.51
CBLN3-201ENST00000267406 LINC00596Q86U02 117 aa18.25■□□□□ 0.51
CBLN3-201ENST00000267406 SPACA1Q9HBV2 294 aa18.25■□□□□ 0.51
CBLN3-201ENST00000267406 KLF2Q9Y5W3 355 aaPredicted RBP18.25■□□□□ 0.51
CBLN3-201ENST00000267406 NKX2-8O15522 239 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 TNFSF12O43508 249 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 TNFSF10P50591 281 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 TMEM88Q6PEY1 159 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 GCNT2Q8N0V5 402 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 LILRB1Q8NHL6 650 aaPredicted RBP18.24■□□□□ 0.51
CBLN3-201ENST00000267406 NRIP2Q9BQI9 281 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 DLL3Q9NYJ7 618 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 BORCS7-ASMTA0A0B4J1R7 106 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 RNASEK-C17orf49H0YIS7 233 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 ZNF14P17017 642 aaPredicted RBP18.24■□□□□ 0.51
CBLN3-201ENST00000267406 ASCL1P50553 236 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 ERVS71-1P61550 626 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 PCSK4Q6UW60 755 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 WDR86Q86TI4 376 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 PKIBQ9C010 78 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 ZNF175Q9Y473 711 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 FAM186AA6NE01 2351 aa18.24■□□□□ 0.51
CBLN3-201ENST00000267406 WISP2O76076 250 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 CDS2O95674 445 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 CTXN2P0C2S0 81 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 OR8U9P0C7N5 309 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 GNMTQ14749 295 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 SWI5Q1ZZU3 235 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 OR8U1Q8NH10 309 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 GMPPAQ96IJ6 420 aaPredicted RBP18.23■□□□□ 0.51
CBLN3-201ENST00000267406 RIMS4Q9H426 269 aaPredicted RBP18.23■□□□□ 0.51
CBLN3-201ENST00000267406 ADAM20O43506 726 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 ZNF44P15621 663 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 IGHV1-2P23083 117 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 IDH3GP51553 393 aaPredicted RBP18.23■□□□□ 0.51
CBLN3-201ENST00000267406 CCL11P51671 97 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 SOX8P57073 446 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 POLR2GP62487 172 aaKnown RBP eCLIP18.23■□□□□ 0.51
CBLN3-201ENST00000267406 GINS3Q9BRX5 216 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 SEC11CQ9BY50 192 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 OR2J1Q9GZK6 312 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 C11orf1Q9H5F2 150 aa18.23■□□□□ 0.51
CBLN3-201ENST00000267406 FAM24AA6NFZ4 105 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 J3QT63 122 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 DEGS1O15121 323 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 LYZL6O75951 148 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 F2RL1P55085 397 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 CLRN3Q8NCR9 226 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 GTF3AQ92664 365 aaKnown RBP18.22■□□□□ 0.51
CBLN3-201ENST00000267406 SH3BGRL3Q9H299 93 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 TRAV39A0A0B4J263 110 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 SMPD2O60906 423 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 NKX2-1P43699 371 aaPredicted RBP18.22■□□□□ 0.51
CBLN3-201ENST00000267406 B2MP61769 119 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 PPP1CBP62140 327 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 EWSR1Q01844 656 aaKnown RBP eCLIP18.22■□□□□ 0.51
CBLN3-201ENST00000267406 Q6P435 159 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 BOD1Q96IK1 185 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 MAGT1Q9H0U3 335 aa18.22■□□□□ 0.51
CBLN3-201ENST00000267406 FAM212BQ9NTI7 297 aaPredicted RBP18.22■□□□□ 0.51
CBLN3-201ENST00000267406 PURGQ9UJV8 347 aaKnown RBP18.22■□□□□ 0.51
CBLN3-201ENST00000267406 TRBV6-6A0A0A6YYG2 114 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 IGHV3-64DA0A0J9YX35 117 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 C9JQL5 133 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 CD80P33681 288 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 NPBWR1P48145 328 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 HLA-DRB3P79483 266 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 ALKBH6Q3KRA9 238 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 CXorf66Q5JRM2 361 aaPredicted RBP18.21■□□□□ 0.51
CBLN3-201ENST00000267406 ZNF324BQ6AW86 544 aaPredicted RBP18.21■□□□□ 0.51
CBLN3-201ENST00000267406 ZNF880Q6PDB4 577 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 RTL8AQ9BWD3 113 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 CDH20Q9HBT6 801 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 SEC11BP0C7V7 166 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 SPP1P10451 314 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 UCP1P25874 307 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 UBE2NP61088 152 aaKnown RBP18.21■□□□□ 0.51
CBLN3-201ENST00000267406 CBLN2Q8IUK8 224 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 SPAG16Q8N0X2 631 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 HSD17B11Q8NBQ5 300 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 FDCSPQ8NFU4 85 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 KIRREL1Q96J84 757 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 TRIB1Q96RU8 372 aa18.21■□□□□ 0.51
CBLN3-201ENST00000267406 SIRPB1O00241 398 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 SSSCA1O60232 199 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 PGLYRP1O75594 196 aaPredicted RBP18.2■□□□□ 0.5
CBLN3-201ENST00000267406 NXPH3O95157 252 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 CD5P06127 495 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 SFTA3P0C7M3 94 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 CMTM1Q8IZ96 169 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 OR2C3Q8N628 320 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 SCCPDHQ8NBX0 429 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 DEFB124Q8NES8 71 aa18.2■□□□□ 0.5
CBLN3-201ENST00000267406 OR10J5Q8NHC4 309 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms