RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 LEMD1Q68G75 181 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 TMEM217Q8N7C4 229 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 OR5D18Q8NGL1 313 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 LYRM2Q9NU23 88 aaPredicted RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 PRSS50Q9UI38 385 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ANXA10Q9UJ72 324 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 SSSCA1O60232 199 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 FXYD4P59646 89 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 C17orf67Q0P5P2 114 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 C1orf61Q13536 156 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 ZNF542PQ5EBM4 170 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 TOMM20LQ6UXN7 152 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 SPEM1Q8N4L4 309 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 SSC4DQ8WTU2 575 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 HDHD3Q9BSH5 251 aaPredicted RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 LRRC61Q9BV99 259 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 SLC2A9Q9NRM0 540 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 OR6C3Q9NZP0 311 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 KNL1Q8NG31 2342 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 ZNF850A8MQ14 1090 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 ZNF205O95201 554 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 HRASP01112 189 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 TAS2R30P59541 319 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 RANP62826 216 aaKnown RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 IL24Q13007 206 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 ENDOGQ14249 297 aaKnown RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 C6orf201Q7Z4U5 140 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 C1QL2Q7Z5L3 287 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 ABHD12BQ7Z5M8 362 aaPredicted RBP11.35□□□□□ -0.59
NUP54-201ENST00000264883 SLC38A9Q8NBW4 561 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 SERINC1Q9NRX5 453 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 GON4LQ3T8J9 2241 aa11.35□□□□□ -0.59
NUP54-201ENST00000264883 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 NKX2-6A6NCS4 301 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 BIDP55957 195 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 MTCP1P56278 107 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 SELENOTP62341 195 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 GRB2P62993 217 aaKnown RBP11.34□□□□□ -0.59
NUP54-201ENST00000264883 BSXQ3C1V8 233 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 DMRTC1Q5HYR2 192 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 CISD2Q8N5K1 135 aaKnown RBP11.34□□□□□ -0.59
NUP54-201ENST00000264883 FAM71F1Q96KD3 344 aaPredicted RBP11.34□□□□□ -0.59
NUP54-201ENST00000264883 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
NUP54-201ENST00000264883 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 NECAP2Q9NVZ3 263 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 B3GAT1Q9P2W7 334 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 POLR1DQ9Y2S0 133 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 WISP1O95388 367 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 IL11P20809 199 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 HNF1AP20823 631 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 PTTG1IPP53801 180 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 PRDX4Q13162 271 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 KCNMB1Q16558 191 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 TDRG1Q3Y452 100 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 OR2T10Q8NGZ9 312 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 KLHDC7BQ96G42 594 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 TM2D1Q9BX74 207 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
NUP54-201ENST00000264883 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
NUP54-201ENST00000264883 IGHV5-51A0A0C4DH38 117 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 LIPT2A6NK58 231 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 CDS2O95674 445 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 IGHG1P01857 330 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 FBLP22087 321 aaKnown RBP11.33□□□□□ -0.6
NUP54-201ENST00000264883 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
NUP54-201ENST00000264883 GABREP78334 506 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 ZNF92Q03936 586 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 NSDHLQ15738 373 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 CST9LP1Q5W188 147 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
NUP54-201ENST00000264883 TMEM256Q8N2U0 113 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 AGBL5Q8NDL9 886 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 OR8B12Q8NGG6 310 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 MED29Q9NX70 200 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 LHFPL6Q9Y693 200 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 TRBV11-1A0A0K0K1C0 115 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 NKX6-3A6NJ46 265 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 C17orf51A8MQB3 221 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 MSTNO14793 375 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 CD27P26842 260 aa11.33□□□□□ -0.6
NUP54-201ENST00000264883 OR1D4P47884 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms