RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SRP19P09132 144 aaKnown RBP13.19□□□□□ -0.3
CASC3-201ENST00000264645 PTPMT1Q8WUK0 201 aaPredicted RBP13.19□□□□□ -0.3
CASC3-201ENST00000264645 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 CER1O95813 267 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 STARD6P59095 220 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 OR1F12Q8NHA8 337 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 ABHD14AQ9BUJ0 271 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 TPPP3Q9BW30 176 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 DIRC3C9JPN6 131 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
CASC3-201ENST00000264645 IER3P46695 156 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 EGR4Q05215 589 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 NANOS1Q8WY41 292 aaKnown RBP13.19□□□□□ -0.3
CASC3-201ENST00000264645 FGF11Q92914 225 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 PLPPR2Q96GM1 343 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 ACY3Q96HD9 319 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
CASC3-201ENST00000264645 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 HDGFL3Q9Y3E1 203 aa13.19□□□□□ -0.3
CASC3-201ENST00000264645 IGHV5-51A0A0C4DH38 117 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 DXOO77932 396 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 MYOGP15173 224 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 CLDN15P56746 228 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 FZD5Q13467 585 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 CEBPEQ15744 281 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 RNASEKQ6P5S7 137 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 PPP1R35Q8TAP8 253 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 MRGPRFQ96AM1 343 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 OPN3Q9H1Y3 402 aaPredicted RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 MYLKQ15746 1914 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 TNFSF14O43557 240 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 FAM157CP0CG43 387 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 SOD3P08294 240 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 HOXA6P31267 233 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 THBS3P49746 956 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 SUCLG1P53597 346 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 MRPS21P82921 87 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 HLA-DRB5Q30154 266 aa13.18□□□□□ -0.3
CASC3-201ENST00000264645 GTF3AQ92664 365 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 RIMS4Q9H426 269 aaPredicted RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 MDC1Q14676 2089 aaKnown RBP13.18□□□□□ -0.3
CASC3-201ENST00000264645 C9JQL5 133 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 CXCL13O43927 109 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 HINT1P49773 126 aaPredicted RBP13.17□□□□□ -0.3
CASC3-201ENST00000264645 COL10A1Q03692 680 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 CD207Q9UJ71 328 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 ZNF217O75362 1048 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 CXCL1P09341 107 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 ZDHHC23Q8IYP9 409 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 OR10G3Q8NGC4 313 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 ICE1Q9Y2F5 2266 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 GRIFINA4D1Z8 144 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 SPINT1O43278 529 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 ZNF32P17041 273 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 SSR4P51571 173 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 SUMO3P55854 103 aaPredicted RBP13.17□□□□□ -0.3
CASC3-201ENST00000264645 ELOBQ15370 118 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
CASC3-201ENST00000264645 IGHV2-70P01814 119 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 GNG10P50151 68 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 GTF2H5Q6ZYL4 71 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 HIST1H2BLQ99880 126 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 BARX1Q9HBU1 254 aaPredicted RBP13.16□□□□□ -0.3
CASC3-201ENST00000264645 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 FOXJ2Q9P0K8 574 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 GVINP1Q7Z2Y8 2422 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 WDR81Q562E7 1941 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 LIPT2A6NK58 231 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 CCL20P78556 96 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 HIST3H2BBQ8N257 126 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 APH1AQ96BI3 265 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 RBKSQ9H477 322 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 TRAV39A0A0B4J263 110 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
CASC3-201ENST00000264645 FOXS1O43638 330 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 CBR3O75828 277 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 FKBP2P26885 142 aaKnown RBP13.16□□□□□ -0.3
CASC3-201ENST00000264645 SHHQ15465 462 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 TMEM230Q96A57 120 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
CASC3-201ENST00000264645 IZUMO4Q1ZYL8 232 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 STUMQ69YW2 141 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 GNRHR2Q96P88 292 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 ANGPTL4Q9BY76 406 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 TNFSF11O14788 317 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 FAM166BA8MTA8 275 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 LYPD3O95274 346 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms