RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF141Q15928 474 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 ZNF552Q9H707 407 aaPredicted RBP10.6□□□□□ -0.71
SMG6-201ENST00000263073 ZFC3H1O60293 1989 aaKnown RBP10.6□□□□□ -0.71
SMG6-201ENST00000263073 A0A1W2PP11 408 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 CDIPTO14735 213 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 LMX1BO60663 402 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 GOSR1O95249 250 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 NMBP08949 121 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 PMELP40967 661 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 PDPNQ86YL7 162 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 OR11H4Q8NGC9 324 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 OR4C12Q96R67 309 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 SCN1AP35498 2009 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 APCSP02743 223 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 GZMMP51124 257 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 RAB7AP51149 207 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 MMP16P51512 607 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 RSG1Q9BU20 258 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 TRBV5-3A0A0A0MS03 114 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 SEMA7AO75326 666 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 ZNF343Q6P1L6 599 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 TMEM92Q6UXU6 159 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 SCGB1D4Q6XE38 83 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 SFTPA2Q8IWL1 248 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 OR4A4PQ8NGN8 299 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 UCN2Q96RP3 112 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 SPAG17Q6Q759 2223 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 PCM1Q15154 2024 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 OR4A47Q6IF82 309 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 ATG4DQ86TL0 474 aaPredicted RBP10.59□□□□□ -0.71
SMG6-201ENST00000263073 BCORQ6W2J9 1755 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 ZNF273Q14593 569 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 ZIC1Q15915 447 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 DHRS13Q6UX07 377 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 RPEQ96AT9 228 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
SMG6-201ENST00000263073 WDR34Q96EX3 536 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 A0A1B0GV90 55 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 MBPP02686 304 aaPredicted RBP10.59□□□□□ -0.71
SMG6-201ENST00000263073 NMUP48645 174 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
SMG6-201ENST00000263073 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 TMEM52Q8NDY8 209 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 MRPL30Q8TCC3 161 aaKnown RBP10.59□□□□□ -0.71
SMG6-201ENST00000263073 NRIP2Q9BQI9 281 aa10.59□□□□□ -0.71
SMG6-201ENST00000263073 KIAA1551Q9HCM1 1747 aa10.58□□□□□ -0.71
SMG6-201ENST00000263073 K7ESF4 209 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 ZNF841Q6ZN19 808 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 HES7Q9BYE0 225 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 PPIL1Q9Y3C6 166 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 ZNF660Q6AZW8 331 aaPredicted RBP10.58□□□□□ -0.72
SMG6-201ENST00000263073 SLC23A3Q6PIS1 610 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 SCN3AQ9NY46 2000 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 CISD3P0C7P0 127 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 MPLP40238 635 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 HSPB9Q9BQS6 159 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 OR6C3Q9NZP0 311 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 SERTM1A2A2V5 107 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 P01737 135 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 ZNF766Q5HY98 468 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 PCOLCE2Q9UKZ9 415 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 MYO7AQ13402 2215 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 KNL1Q8NG31 2342 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 ORM1P02763 201 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 KIR3DL2P43630 455 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
SMG6-201ENST00000263073 WDR74Q6RFH5 385 aaPredicted RBP10.58□□□□□ -0.72
SMG6-201ENST00000263073 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 OR5A2Q8NGI9 324 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 TM4SF19Q96DZ7 209 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
SMG6-201ENST00000263073 EAF1Q96JC9 268 aaPredicted RBP10.58□□□□□ -0.72
SMG6-201ENST00000263073 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 CTGFP29279 349 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 DRD3P35462 400 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 IGFBP7Q16270 282 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 TUSC5Q8IXB3 177 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 PCGF1Q9BSM1 259 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 HELTA6NFD8 242 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 SIAH2O43255 324 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 MGPP08493 103 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 MELTFP08582 738 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 REG1BP48304 166 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 TINAGQ9UJW2 476 aa10.57□□□□□ -0.72
SMG6-201ENST00000263073 PITPNC1Q9UKF7 332 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms