RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 TMEM64Q6YI46 380 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 Q6ZWC4 215 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 MRPL21Q7Z2W9 205 aaKnown RBP10.28□□□□□ -0.76
CCNA1-201ENST00000255465 ADGRE4PQ86SQ3 457 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 OOSP2Q86WS3 158 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 ELOA3Q8NG57 546 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 OR2T10Q8NGZ9 312 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
CCNA1-201ENST00000255465 EFCAB11Q9BUY7 163 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 PARP12Q9H0J9 701 aaKnown RBP10.28□□□□□ -0.76
CCNA1-201ENST00000255465 SIRT3Q9NTG7 399 aaPredicted RBP10.28□□□□□ -0.76
CCNA1-201ENST00000255465 ANAPC10Q9UM13 185 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 PPP1R3CQ9UQK1 317 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 TPRP12270 2363 aaKnown RBP10.28□□□□□ -0.76
CCNA1-201ENST00000255465 HEATR5BQ9P2D3 2071 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 FRYQ5TBA9 3013 aa10.28□□□□□ -0.76
CCNA1-201ENST00000255465 MEGF11A6BM72 1044 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 H7BYZ3 331 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 CDC42EP2O14613 210 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 SCGB1D2O95969 90 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 PPIAL4GP0DN37 164 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 GNB3P16520 340 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 GDF1P27539 372 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 SLC6A6P31641 620 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 CRYBA4P53673 196 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 FXYD6P3P58550 94 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 C17orf67Q0P5P2 114 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 RAET1LQ5VY80 246 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 ZNF880Q6PDB4 577 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 ZNF627Q7L945 461 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 MEX3DQ86XN8 651 aaKnown RBP10.27□□□□□ -0.76
CCNA1-201ENST00000255465 TMEM217Q8N7C4 229 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 OR5AU1Q8NGC0 362 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.76
CCNA1-201ENST00000255465 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 RASL10BQ96S79 203 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 SMAD5Q99717 465 aaKnown RBP10.27□□□□□ -0.76
CCNA1-201ENST00000255465 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 PLAGL1Q9UM63 463 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 LOXL2Q9Y4K0 774 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 SPTBP11277 2137 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 CHD8Q9HCK8 2581 aa10.27□□□□□ -0.76
CCNA1-201ENST00000255465 ACACAQ13085 2346 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 ASPMQ8IZT6 3477 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 CPSF4LA6NMK7 179 aaKnown RBP10.27□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF891A8MT65 544 aaPredicted RBP10.27□□□□□ -0.77
CCNA1-201ENST00000255465 LCN6P62502 163 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 GNB2P62879 340 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 BAXQ07812 192 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 MPV17LQ2QL34 196 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 ALG10Q5BKT4 473 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 CYP2G1PQ6ZSU1 146 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 MUC15Q8N387 334 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 CSNK1A1LQ8N752 337 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF709Q8N972 641 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 CCDC71LQ8N9Z2 235 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 FER1L6-AS1Q8NA97 138 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 BHLHE23Q8NDY6 225 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 OR5A2Q8NGI9 324 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 PSMF1Q92530 271 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 IL22RA2Q969J5 263 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 UBE2E3Q969T4 207 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 MCHR1Q99705 422 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 DMRT3Q9NQL9 472 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 RHBDD3Q9Y3P4 386 aa10.27□□□□□ -0.77
CCNA1-201ENST00000255465 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 PPIAL4CA0A0B4J2A2 164 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF732B4DXR9 585 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 PPIAL4DF5H284 164 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 HCRTR1O43613 425 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 DXOO77932 396 aaKnown RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 CTSDP07339 412 aaPredicted RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 JMJD7P0C870 316 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 CCL4P13236 92 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 THBS3P49746 956 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 CLDN15P56746 228 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 TLE3Q04726 772 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 IAH1Q2TAA2 248 aaPredicted RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 IGF2-ASQ6U949 168 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 NPEPL1Q8NDH3 523 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 FNDC9Q8TBE3 224 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 TSEN15Q8WW01 171 aaKnown RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 ZG16BQ96DA0 208 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 ZMYND19Q96E35 227 aaPredicted RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 SIGMAR1Q99720 223 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 SPXQ9BT56 116 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 OCIAD1Q9NX40 245 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 DKK4Q9UBT3 224 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
CCNA1-201ENST00000255465 AK3Q9UIJ7 227 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 HSF4Q9ULV5 492 aa10.26□□□□□ -0.77
CCNA1-201ENST00000255465 SDK2Q58EX2 2172 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms