RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRAV39A0A0B4J263 110 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 IGLV1-47P01700 117 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 GPR50Q13585 617 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 GPR176Q14439 515 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 LIPKQ5VXJ0 399 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 BRICD5Q6PL45 260 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 CCBE1Q6UXH8 406 aaPredicted RBP18.51■□□□□ 0.55
LSM4-201ENST00000252816 RTN4RL2Q86UN3 420 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 NKAIN3Q8N8D7 197 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 ZNF565Q8N9K5 539 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 MRGPRDQ8TDS7 321 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 KIRREL1Q96J84 757 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 CALYQ9NYX4 217 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 TCF19Q9Y242 345 aa18.51■□□□□ 0.55
LSM4-201ENST00000252816 A0A087X0M5 115 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 A0A1B0GX30 115 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 SC5DO75845 299 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 HTR1DP28221 377 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 ATAD3CQ5T2N8 411 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 PRSS48Q7RTY5 328 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 LRRTM1Q86UE6 522 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 TMEM104Q8NE00 496 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 UFD1Q92890 307 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 CITED1Q99966 193 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 UQCC2Q9BRT2 126 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 CCDC90BQ9GZT6 254 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 BANF2Q9H503 90 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 LINC00574Q9H8X3 128 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 ABCB10Q9NRK6 738 aa18.5■□□□□ 0.55
LSM4-201ENST00000252816 A6NDX4 124 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 HSMCR30P0CW71 290 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 NFYBP25208 207 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 MAP2K4P45985 399 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 DYNLT3P51808 116 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 TPBGQ13641 420 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 PRR31Q5SQ13 230 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 LIAT1Q6ZQX7 453 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 CEACAM19Q7Z692 300 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 TMEM219Q86XT9 240 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 ZNF596Q8TC21 504 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 TMEM203Q969S6 136 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 MRPS24Q96EL2 167 aaKnown RBP18.49■□□□□ 0.55
LSM4-201ENST00000252816 ZNF696Q9H7X3 374 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 RAB18Q9NP72 206 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 DPM3Q9P2X0 92 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 RAB26Q9ULW5 256 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 SIGLEC9Q9Y336 463 aa18.49■□□□□ 0.55
LSM4-201ENST00000252816 NPIPB11E5RHQ5 1161 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 IL1AP01583 271 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 SSTR5P35346 364 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 RFESDQ8TAC1 157 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 TCF7L1Q9HCS4 588 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 IDI2-AS1Q9NZ38 188 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 RCC2Q9P258 522 aaKnown RBP18.48■□□□□ 0.55
LSM4-201ENST00000252816 FBLN5Q9UBX5 448 aa18.48■□□□□ 0.55
LSM4-201ENST00000252816 TMEM30CPA0ZSE6 113 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 UCHL1P09936 223 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 MGMTP16455 207 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 GABRA5P31644 462 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 VHLP40337 213 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 KIR2DS4P43632 304 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 RPS25P62851 125 aaKnown RBP18.47■□□□□ 0.55
LSM4-201ENST00000252816 HLA-DRB5Q30154 266 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 RBM48Q5RL73 367 aaKnown RBP18.47■□□□□ 0.55
LSM4-201ENST00000252816 TMEM91Q6ZNR0 172 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 PHYHIPQ92561 330 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 CYYR1Q96J86 154 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 SELENOIQ9C0D9 397 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 ISYNA1Q9NPH2 558 aa18.47■□□□□ 0.55
LSM4-201ENST00000252816 TOR1AO14656 332 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 CRTAPO75718 401 aaPredicted RBP18.46■□□□□ 0.55
LSM4-201ENST00000252816 IGHV3-7P01780 117 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 SRMP19623 302 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 MLLT11Q13015 90 aaPredicted RBP18.46■□□□□ 0.55
LSM4-201ENST00000252816 LTC4SQ16873 150 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 HSD17B12Q53GQ0 312 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 OR4C13Q8NGP0 309 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 NEK7Q8TDX7 302 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 LEAP2Q969E1 77 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 Q96M66 194 aa18.46■□□□□ 0.55
LSM4-201ENST00000252816 RANBP3Q9H6Z4 567 aaPredicted RBP18.46■□□□□ 0.55
LSM4-201ENST00000252816 FAM90A22PA8MWA6 464 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 LEUTXA8MZ59 168 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 LY6LH3BQJ8 138 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 BUB1B-PAK6H3BSN5 160 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 F2RL2O00254 374 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 MT-ND4P03905 459 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 CPEP16870 476 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 PRRX1P54821 245 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 SIGIRRQ6IA17 410 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 ZNF497Q6ZNH5 498 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 OR9G1Q8NH87 305 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 CCDC107Q8WV48 283 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 FAM46BQ96A09 425 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 MGLLQ99685 303 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 NPFFR1Q9GZQ6 430 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 SPACA1Q9HBV2 294 aa18.45■□□□□ 0.54
LSM4-201ENST00000252816 CD37P11049 281 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 EFNB2P52799 333 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 RBM39Q14498 530 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms