RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ERGIC1Q969X5 290 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 BSCL2Q96G97 398 aaPredicted RBP18.41■□□□□ 0.54
CLN6-201ENST00000249806 UBE2J1Q9Y385 318 aaPredicted RBP18.41■□□□□ 0.54
CLN6-201ENST00000249806 PRR33A8MZF0 331 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 SIRPB1O00241 398 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 GPR31O00270 319 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 APOC3P02656 99 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 GRPP07492 148 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 AKR1C2P52895 323 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 AKR1C1Q04828 323 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 ACSF3Q4G176 576 aaPredicted RBP18.4■□□□□ 0.54
CLN6-201ENST00000249806 FAM185AQ8N0U4 392 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 PIGMQ9H3S5 423 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 DKK4Q9UBT3 224 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 TMED3Q9Y3Q3 217 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 KIAA2026Q5HYC2 2103 aa18.4■□□□□ 0.54
CLN6-201ENST00000249806 ZNF891A8MT65 544 aaPredicted RBP18.39■□□□□ 0.54
CLN6-201ENST00000249806 E5RGE8 158 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 TNFSF12O43508 249 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 CEACAM4O75871 244 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 IGKV3-15P01624 115 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 CTXN2P0C2S0 81 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 CBR1P16152 277 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 COX5AP20674 150 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 ARHGDIBP52566 201 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 ERVK11-1P61568 191 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 BTN1A1Q13410 526 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 NSG2Q9Y328 171 aa18.39■□□□□ 0.54
CLN6-201ENST00000249806 NKX2-6A6NCS4 301 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 ZNF705EA8MWA4 302 aaPredicted RBP18.39■□□□□ 0.53
CLN6-201ENST00000249806 IQCF6A8MYZ5 107 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 CNOT4O95628 575 aaKnown RBP18.39■□□□□ 0.53
CLN6-201ENST00000249806 OR2H2O95918 312 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 HOXC12P31275 282 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 IL1F10Q8WWZ1 152 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 NARS2Q96I59 477 aaKnown RBP18.39■□□□□ 0.53
CLN6-201ENST00000249806 KIRREL1Q96J84 757 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 TINAGQ9UJW2 476 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 ZDHHC8Q9ULC8 765 aa18.39■□□□□ 0.53
CLN6-201ENST00000249806 HEATR1Q9H583 2144 aaKnown RBP18.39■□□□□ 0.53
CLN6-201ENST00000249806 TRBV6-6A0A0A6YYG2 114 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 FBXO24O75426 580 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 GLAP06280 429 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 NUBP1P53384 320 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 ZNF880Q6PDB4 577 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 ZNF610Q8N9Z0 462 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 IFT22Q9H7X7 185 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 SPEF1Q9Y4P9 236 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 WDR1O75083 606 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 HOXA4Q00056 320 aaPredicted RBP18.38■□□□□ 0.53
CLN6-201ENST00000249806 OR8G1Q15617 311 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 CXorf67Q86X51 503 aaPredicted RBP18.38■□□□□ 0.53
CLN6-201ENST00000249806 ZNF695Q8IW36 515 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 PRSS33Q8NF86 280 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 PLPPR1Q8TBJ4 325 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 OPN3Q9H1Y3 402 aaPredicted RBP18.38■□□□□ 0.53
CLN6-201ENST00000249806 PLEKHA2Q9HB19 425 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 PLSCR4Q9NRQ2 329 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 POLDIP2Q9Y2S7 368 aa18.38■□□□□ 0.53
CLN6-201ENST00000249806 SLC33A1O00400 549 aaPredicted RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 RND3P61587 244 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 MST1LQ2TV78 715 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 ZNF324BQ6AW86 544 aaPredicted RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 ATRAIDQ6UW56 229 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 SELENOHQ8IZQ5 122 aaKnown RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 PRR18Q8N4B5 295 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 ZADH2Q8N4Q0 377 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 OR4D5Q8NGN0 318 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 OR10J5Q8NHC4 309 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 TMEM56Q96MV1 263 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 NRIP2Q9BQI9 281 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 OBP2BQ9NPH6 170 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 PLA2G2EQ9NZK7 142 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 LPAR3Q9UBY5 353 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 FZR1Q9UM11 496 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 TMEM56-RWDD3S4R434 201 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 TM4SF5O14894 197 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 ST8SIA3O43173 380 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 TNFSF13O75888 250 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 NXPH2O95156 264 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 PGA5P0DJD9 388 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 HLA-DRB3P79483 266 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 ZNF169Q14929 603 aaPredicted RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 OR4A4PQ8NGN8 299 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 LILRB1Q8NHL6 650 aaPredicted RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 UBALD1Q8TB05 177 aa18.37■□□□□ 0.53
CLN6-201ENST00000249806 ERRFI1Q9UJM3 462 aaPredicted RBP18.37■□□□□ 0.53
CLN6-201ENST00000249806 CEP250Q9BV73 2442 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 AHRRA9YTQ3 701 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 MLNRO43193 412 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 HOXB1P14653 301 aaPredicted RBP18.36■□□□□ 0.53
CLN6-201ENST00000249806 SRSF3P84103 164 aaKnown RBP18.36■□□□□ 0.53
CLN6-201ENST00000249806 DMBX1Q8NFW5 382 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 STARD4Q96DR4 205 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 RHOFQ9HBH0 211 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 OR1A1Q9P1Q5 309 aa18.36■□□□□ 0.53
CLN6-201ENST00000249806 RCL1Q9Y2P8 373 aaKnown RBP18.36■□□□□ 0.53
CLN6-201ENST00000249806 CDS2O95674 445 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 CECR9P0C854 216 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 EIF5AP63241 154 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms