RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 IFNA21P01568 189 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 NMBP08949 121 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 IGKV1-13P0DP09 117 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 MDH2P40926 338 aaKnown RBP15.63■□□□□ 0.09
HOXC11-201ENST00000243082 HLA-DRB3P79483 266 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 MSMPQ1L6U9 139 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 SPIN3Q5JUX0 258 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 SHEQ5VZ18 495 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 ZNF497Q6ZNH5 498 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 CISD2Q8N5K1 135 aaKnown RBP15.63■□□□□ 0.09
HOXC11-201ENST00000243082 OR4A4PQ8NGN8 299 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 C18orf12Q96KH6 178 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 TUBD1Q9UJT1 453 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 MEMO1Q9Y316 297 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 MPPED1O15442 326 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 LUMP51884 338 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-201ENST00000243082 PRAMEF6Q5VXH4 476 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 ALKBH2Q6NS38 261 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 DOLPP1Q86YN1 238 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 GAPTQ8N292 157 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 SECTM1Q8WVN6 248 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 TP53RKQ96S44 253 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 CEP295Q9C0D2 2601 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 PCDHB10Q9UN67 800 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 POM121CA8CG34 1229 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 M0R1B8 84 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 WNT9BO14905 357 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 RRASP10301 218 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 C3orf36Q3SXR2 165 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 ZNF818PQ6ZRF7 136 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 LYZL2Q7Z4W2 148 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 COMMD7Q86VX2 200 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 FAM185AQ8N0U4 392 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 SPERTQ8NA61 448 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 OR1S1Q8NH92 325 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 LHFPL5Q8TAF8 219 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 DMRTA2Q96SC8 542 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 ARPC5LQ9BPX5 153 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 CABLES2Q9BTV7 478 aa15.62■□□□□ 0.09
HOXC11-201ENST00000243082 HEATR1Q9H583 2144 aaKnown RBP15.62■□□□□ 0.09
HOXC11-201ENST00000243082 MSGN1A6NI15 193 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 A8MXE2 369 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 PHF1O43189 567 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-201ENST00000243082 HAND1O96004 215 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 RND3P61587 244 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 HOXA4Q00056 320 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-201ENST00000243082 RGS7BPQ6MZT1 257 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-201ENST00000243082 WDR82Q6UXN9 313 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 CNTNAP3BQ96NU0 1288 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 ZNF471Q9BX82 626 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-201ENST00000243082 CNTNAP3Q9BZ76 1288 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 SLC5A7Q9GZV3 580 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 MSRB2Q9Y3D2 182 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 TRAV39A0A0B4J263 110 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 C3orf85A0A1B0GTC6 90 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 PET100P0DJ07 73 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 CEBPDP49716 269 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-201ENST00000243082 S100A10P60903 97 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 FAM27E3Q08E93 113 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 LRP11Q86VZ4 500 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 LGI3Q8N145 548 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 ZNF565Q8N9K5 539 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 MUCL1Q96DR8 90 aa15.61■□□□□ 0.09
HOXC11-201ENST00000243082 F5H0A9 414 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-201ENST00000243082 H7C1Q1 480 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 GPR31O00270 319 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 BMP5P22003 454 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 C22orf34Q6ZV56 151 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 TBC1D26Q86UD7 250 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 H1FOOQ8IZA3 346 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-201ENST00000243082 KIRREL1Q96J84 757 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 AQP10Q96PS8 301 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 CCL28Q9NRJ3 127 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 UFSP2Q9NUQ7 469 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 OR14J1Q9UGF5 321 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 A6NLC8 198 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 PRRG2O14669 202 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 PSPNO60542 156 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 GFRA3O60609 400 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 ZNF250P15622 560 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 LMO1P25800 156 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 FIP1L1Q6UN15 594 aaKnown RBP15.6■□□□□ 0.09
HOXC11-201ENST00000243082 ACP7Q6ZNF0 438 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 MOB1BQ7L9L4 216 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 OR10J5Q8NHC4 309 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 CXorf58Q96LI9 332 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 DNAJB11Q9UBS4 358 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 WIPI2Q9Y4P8 454 aa15.6■□□□□ 0.09
HOXC11-201ENST00000243082 CRYAAP02489 173 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 NKX6-1P78426 367 aaPredicted RBP15.59■□□□□ 0.09
HOXC11-201ENST00000243082 FOXRED2Q8IWF2 684 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 TMEM222Q9H0R3 208 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 CYTL1Q9NRR1 136 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 MBNL3Q9NUK0 354 aaKnown RBP15.59■□□□□ 0.09
HOXC11-201ENST00000243082 TRAPPC2LQ9UL33 140 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 OR2W1Q9Y3N9 320 aa15.59■□□□□ 0.09
HOXC11-201ENST00000243082 PIEZO2Q9H5I5 2752 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 A0A0G2JNJ9 132 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 NPIPB11E5RHQ5 1161 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 HSD17B6O14756 317 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms