RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CALHM2Q9HA72 323 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 PAM16Q9Y3D7 125 aa17.22■□□□□ 0.35
HOXC13-201ENST00000243056 MGAQ8IWI9 3026 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 A0A1B0GUS0 222 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 Q6ZVH6 145 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 CPEB2Q7Z5Q1 589 aaKnown RBP17.21■□□□□ 0.35
HOXC13-201ENST00000243056 NFAM1Q8NET5 270 aaPredicted RBP17.21■□□□□ 0.35
HOXC13-201ENST00000243056 SCGB3A2Q96PL1 93 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 WWTR1Q9GZV5 400 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 SDF2L1Q9HCN8 221 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 COPS7AQ9UBW8 275 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 MMDQ15546 238 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 OR5H2Q8NGV7 314 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 SLC46A1Q96NT5 459 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 MS4A10Q96PG2 267 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 GPX7Q96SL4 187 aaPredicted RBP17.21■□□□□ 0.35
HOXC13-201ENST00000243056 SLC5A6Q9Y289 635 aa17.21■□□□□ 0.35
HOXC13-201ENST00000243056 A0A0A6YYD4 124 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 LOC102723971A0A1B0GUV8 181 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 YPEL1O60688 119 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 RAD51DO75771 328 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 UBE2V1Q13404 147 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 ENDOGQ14249 297 aaKnown RBP17.2■□□□□ 0.34
HOXC13-201ENST00000243056 CLEC12BQ2HXU8 276 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 ACTL10Q5JWF8 245 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 TEX43Q6ZNM6 134 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 OR10S1Q8NGN2 331 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 LIN37Q96GY3 246 aaPredicted RBP17.2■□□□□ 0.34
HOXC13-201ENST00000243056 YPEL2Q96QA6 119 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 DNAJB12Q9NXW2 375 aaKnown RBP17.2■□□□□ 0.34
HOXC13-201ENST00000243056 B3GALT5Q9Y2C3 310 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 NSG1A0A0A6YYJ2 146 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 C2orf72A6NCS6 295 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 HSPB2A8KAH6 182 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 NUPR1O60356 82 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 ZNF43P17038 809 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 HSPB2Q16082 182 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 C1orf185Q5T7R7 199 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 GPR157Q5UAW9 335 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 OTOSQ8NHW6 89 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 CT55Q8WUE5 264 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 ZNF319Q9P2F9 582 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 SPTBN4Q9H254 2564 aa17.2■□□□□ 0.34
HOXC13-201ENST00000243056 MEGF11A6BM72 1044 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 OR5G3P0C626 314 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 MPV17LQ2QL34 196 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 PLAC9Q5JTB6 97 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 C6orf15Q6UXA7 325 aaPredicted RBP17.19■□□□□ 0.34
HOXC13-201ENST00000243056 ZNF524Q96C55 264 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 RBKSQ9H477 322 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 OR2J2O76002 312 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 ONECUT2O95948 504 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 OTX2P32243 289 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 HIST1H3AP68431 136 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 CD226Q15762 336 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 HLA-DQA1Q5Y7H0 255 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 C16orf82Q7Z2V1 217 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 TGIF2LYQ8IUE0 185 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 TMEM256Q8N2U0 113 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 OR10G4Q8NGN3 311 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 IL22RA2Q969J5 263 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 TECTBQ96PL2 329 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 VPS25Q9BRG1 176 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 PCGF1Q9BSM1 259 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 TMEM14AQ9Y6G1 99 aa17.19■□□□□ 0.34
HOXC13-201ENST00000243056 IFNA21P01568 189 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 CTXN1P60606 82 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 TPTE2P1Q5T6R2 138 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 MARCH3Q86UD3 253 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 CTDSP1Q9GZU7 261 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 PCNX3Q9H6A9 2034 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 CBLN3Q6UW01 205 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 CATSPERDQ86XM0 798 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 IL22RA1Q8N6P7 574 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 EMG1Q92979 244 aaKnown RBP17.18■□□□□ 0.34
HOXC13-201ENST00000243056 SPRY4Q9C004 299 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 CSTL1Q9H114 145 aa17.18■□□□□ 0.34
HOXC13-201ENST00000243056 SPENQ96T58 3664 aaKnown RBP17.17■□□□□ 0.34
HOXC13-201ENST00000243056 FAM230AA0A1W2PPH8 454 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 TRAPPC6AO75865 159 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 AMY2BP19961 511 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 HOXC12P31275 282 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 IL24Q13007 206 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 LRRC75AQ8NAA5 344 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 CIB3Q96Q77 187 aaPredicted RBP17.17■□□□□ 0.34
HOXC13-201ENST00000243056 WISP1O95388 367 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 TOMM40O96008 361 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 DBHP09172 617 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 PCOLCEQ15113 449 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 OR2Y1Q8NGV0 311 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 GPR84Q9NQS5 396 aa17.17■□□□□ 0.34
HOXC13-201ENST00000243056 LOC107986453A0A1B0GWG9 222 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 SOCS1O15524 211 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 TMEM225BP0DP42 221 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 EWSR1Q01844 656 aaKnown RBP eCLIP17.16■□□□□ 0.34
HOXC13-201ENST00000243056 PLCXD2Q0VAA5 305 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 OR51G1Q8NGK1 321 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 MED12Q93074 2177 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 REEP6Q96HR9 211 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms