RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF121P58317 390 aaPredicted RBP11.3□□□□□ -0.6
VAMP4-201ENST00000236192 DCAF7P61962 342 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 FUT7Q11130 342 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SPRED2Q7Z698 418 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 WNT6Q9Y6F9 365 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 LTC4SQ16873 150 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 PP6455Q8WZ26 134 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 CUTCQ9NTM9 273 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SPCS1Q9Y6A9 102 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
VAMP4-201ENST00000236192 KLF4O43474 513 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR52M1Q8NGK5 317 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 PSMG3Q9BT73 122 aaPredicted RBP11.29□□□□□ -0.6
VAMP4-201ENST00000236192 TAF1P21675 1872 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 SELPP16109 830 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 RTP5Q14D33 572 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 FBXL14Q8N1E6 418 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 SFRP2Q96HF1 295 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 LINC00869P0C866 280 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 CBLN1P23435 193 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR8B3Q8NGG8 313 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 FGF14Q92915 247 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 GOLGA4Q13439 2230 aaKnown RBP11.29□□□□□ -0.6
VAMP4-201ENST00000236192 GBF1Q92538 1859 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 MYADML2A6NDP7 307 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF732B4DXR9 585 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
VAMP4-201ENST00000236192 CD226Q15762 336 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 TMEM25Q86YD3 366 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 OR2A1Q8NGT9 310 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
VAMP4-201ENST00000236192 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 NDUFB4O95168 129 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 AMY1AP04745 511 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 SRIP30626 198 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 EDDM3BP56851 147 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 OR10V1Q8NGI7 309 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 ZPLD1Q8TCW7 415 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 H0YGG7 62 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 PIAS2O75928 621 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 NEURL1O76050 574 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 ADMP35318 185 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 CEACAM6P40199 344 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 MRPS11P82912 194 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 PRSS53Q2L4Q9 553 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 PRTGQ2VWP7 1150 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 RND2P52198 227 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 CCL20P78556 96 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 HNRNPA1L2Q32P51 320 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 TNFP01375 233 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 RPS21P63220 83 aaKnown RBP11.28□□□□□ -0.6
VAMP4-201ENST00000236192 SSX8Q7RTT4 187 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 STARD5Q9NSY2 213 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 SLC17A4Q9Y2C5 497 aa11.28□□□□□ -0.6
VAMP4-201ENST00000236192 SRSF10O75494 262 aaKnown RBP11.27□□□□□ -0.6
VAMP4-201ENST00000236192 CAMPP49913 170 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 PLP2Q04941 152 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 METRNLQ641Q3 311 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 VOPP1Q96AW1 172 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 GFI1Q99684 422 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 CDH20Q9HBT6 801 aa11.27□□□□□ -0.6
VAMP4-201ENST00000236192 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM204Q9BSN7 226 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 G6PC2Q9NQR9 355 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 A0A0J9YY10 115 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 LYL1P12980 280 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 DUSP3P51452 185 aaPredicted RBP11.27□□□□□ -0.61
VAMP4-201ENST00000236192 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
VAMP4-201ENST00000236192 H3BMH7 237 aa11.27□□□□□ -0.61
VAMP4-201ENST00000236192 EPPINO95925 133 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms