RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 LINC00528Q8N1L1 170 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 DEFB125Q8N687 156 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 TCTEX1D1Q8N7M0 179 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 OR2T33Q8NG76 320 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 SMIM10Q96HG1 83 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 DERL3Q96Q80 235 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 RASL10BQ96S79 203 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 AICDAQ9GZX7 198 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 VCX2Q9H322 139 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 WDR54Q9H977 334 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 AK6Q9Y3D8 172 aaKnown RBP4.96□□□□□ -1.62
RFX4-201ENST00000229387 FAM230AA0A1W2PPH8 454 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 A0A1W2PPV9 198 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 EEF1E1-BLOC1S5C9J1V9 151 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 SLC33A1O00400 549 aaPredicted RBP4.96□□□□□ -1.62
RFX4-201ENST00000229387 SIVA1O15304 175 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 RAD51DO75771 328 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 FUT1P19526 365 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 BSGP35613 385 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 DUSP3P51452 185 aaPredicted RBP4.96□□□□□ -1.62
RFX4-201ENST00000229387 PLP1P60201 277 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 PPP1CAP62136 330 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 SRSF7Q16629 238 aaKnown RBP eCLIP4.96□□□□□ -1.62
RFX4-201ENST00000229387 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 SPIN3Q5JUX0 258 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 C1QL3Q5VWW1 255 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 AMMECR1LQ6DCA0 310 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 WDR74Q6RFH5 385 aaPredicted RBP4.96□□□□□ -1.62
RFX4-201ENST00000229387 PRSS41Q7RTY9 318 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 METTL27Q8N6F8 245 aaPredicted RBP4.96□□□□□ -1.62
RFX4-201ENST00000229387 APCDD1LQ8NCL9 501 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 OR4N2Q8NGD1 307 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 OR52R1Q8NGF1 315 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 KLHDC7BQ96G42 594 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 RARRES2Q99969 163 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 DUSP23Q9BVJ7 150 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 OR51I1Q9H343 314 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 ST6GALNAC2Q9UJ37 374 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 B3GALT1Q9Y5Z6 326 aa4.96□□□□□ -1.62
RFX4-201ENST00000229387 ASCC3Q8N3C0 2202 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 TMEM189A5PLL7 270 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 FBLL1A6NHQ2 334 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 CPSF4LA6NMK7 179 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 TRAF3IP2O43734 574 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 HAND1O96004 215 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 CGAP01215 116 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 HMGN2P05204 90 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 NID1P14543 1247 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 EGR4Q05215 589 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 ZFP36L1Q07352 338 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 SMAGPQ0VAQ4 97 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 PPP1R1AQ13522 171 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 EXOSC7Q15024 291 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 NNATQ16517 81 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 CD300EQ496F6 205 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 TMEM196Q5HYL7 178 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 SIRT6Q8N6T7 355 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 OR2A1Q8NGT9 310 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 OR10X1Q8NGY0 326 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 BTF3L4Q96K17 158 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 ZNF681Q96N22 645 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 GPR174Q9BXC1 333 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 GLIPR2Q9H4G4 154 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 V9GY05 133 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 TICRRQ7Z2Z1 1910 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 A0A1W2PR80 420 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 HMGN4O00479 90 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 MPPED1O15442 326 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 LDB3O75112 727 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 KLF8O95600 359 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 MAS1P04201 325 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 CELA2BP08218 269 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 PNMTP11086 282 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 CD99P14209 185 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 ID1P41134 155 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 RND3P61587 244 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 RPS11P62280 158 aaKnown RBP eCLIP4.95□□□□□ -1.62
RFX4-201ENST00000229387 HIST3H3Q16695 136 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 LTC4SQ16873 150 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 C5orf47Q569G3 176 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 ZNF709Q8N972 641 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 Q8N976 141 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 OR4F17Q8NGA8 305 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 PSMF1Q92530 271 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 FAM46BQ96A09 425 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 ZMYND19Q96E35 227 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 C5orf30Q96GV9 206 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 OR4F4Q96R69 305 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 GPA33Q99795 319 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 NUDT9Q9BW91 350 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 CLDND1Q9NY35 253 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 AHSPQ9NZD4 102 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 UBE2J1Q9Y385 318 aaPredicted RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 PTRH2Q9Y3E5 179 aaKnown RBP4.95□□□□□ -1.62
RFX4-201ENST00000229387 WDR45Q9Y484 360 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 TRIOBPQ9H2D6 2365 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 DAPL1A0PJW8 107 aa4.95□□□□□ -1.62
RFX4-201ENST00000229387 TSPAN11A1L157 253 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms