RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 TOMM40LQ969M1 308 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 CABLES2Q9BTV7 478 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
LAPTM4A-201ENST00000175091 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 ADH4P08319 380 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 CTXN2P0C2S0 81 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 OR4A8P0C604 315 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 AADACP22760 399 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 NFYAP23511 347 aaPredicted RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 FXYD4P59646 89 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 CDSNQ15517 529 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 C5orf24Q7Z6I8 188 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 MOGAT3Q86VF5 341 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 CRYM-AS1A6NIL9 109 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 RFPL4AA6NLU0 287 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 RFPL4AL1F8VTS6 287 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 BET1O15155 118 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 TUSC2O75896 110 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 RGS11O94810 467 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 TK1P04183 234 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 KCNJ3P48549 501 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 HERV-K104P61576 105 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 SEC61A1P61619 476 aaKnown RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 IFITM2Q01629 132 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 SRSF4Q08170 494 aaKnown RBP13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 SLC38A6Q8IZM9 456 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 PLPPR2Q96GM1 343 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
LAPTM4A-201ENST00000175091 DIDO1Q9BTC0 2240 aaKnown RBP13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 HIVEP3Q5T1R4 2406 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 CCSO14618 274 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 LHBP01229 141 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 TNFSF4P23510 183 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 OR3A1P47881 315 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 SLC9A3R2Q15599 337 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 OR5T2Q8NGG2 359 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 GRPEL2Q8TAA5 225 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 NDRG3Q9UGV2 375 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
LAPTM4A-201ENST00000175091 TRBV6-7A0A0A0MS04 114 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 TMEM30CPA0ZSE6 113 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 NPIPB11E5RHQ5 1161 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 CD8AP01732 235 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 CD55P08174 381 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 PIGPP57054 158 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 PAX5Q02548 391 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 COL10A1Q03692 680 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 SNTB1Q13884 538 aaKnown RBP13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 HMGN3Q15651 99 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 ANKRD55Q3KP44 614 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 CD177Q8N6Q3 437 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 COQ8AQ8NI60 647 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 Q8TCH9 128 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 CA5BP1Q8WTZ4 195 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 ERGIC1Q969X5 290 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 COQ2Q96H96 371 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 RSRP1Q9BUV0 290 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 SLC2A9Q9NRM0 540 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 HCFC1P51610 2035 aa13.1□□□□□ -0.31
LAPTM4A-201ENST00000175091 IGKV1D-17A0A075B6S4 117 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 DIRAS3O95661 229 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 TFF1P04155 84 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 PSG2P11465 335 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 SLC35E4Q6ICL7 350 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 LINC01560Q8TB33 94 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 ROS1P08922 2347 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 RAI1Q7Z5J4 1906 aaPredicted RBP13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 TANC2Q9HCD6 1990 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 C17orf100A8MU93 164 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 E7EQL1 145 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 M0R233 179 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 RGS13O14921 159 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 ZNF737O75373 536 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 IFNA2P01563 188 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 TFF3Q07654 80 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 ABCA11PQ4W5N1 156 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms