RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Actl6aQ9Z2N8 429 aaKnown RBP11.62□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Lama1P19137 3084 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Ighv5-15A0A0A6YWC7 117 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Trbv15A0A0A6YYE3 115 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Stpg3A2RSX4 306 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Siglec15A7E1W8 342 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Ankrd29D3YVV3 309 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr173E9QAT7 321 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Vmn2r58K7N6V2 862 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Atpif1O35143 106 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Tcstv3O70518 169 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Hnf1aP22361 628 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Mep1aP28825 747 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Hist1h1dP43277 221 aaKnown RBP11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 SgcbP82349 320 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 2900092C05RikQ5I0V9 184 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Vmn1r223Q5SSA0 361 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Zfp677Q6PEP4 634 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 ApoolQ78IK4 265 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Q8BTC1 67 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 C1ql2Q8CFR0 287 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Yif1aQ91XB7 293 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Ms4a4dQ99N05 225 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Slc29a3Q99P65 475 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Aig1Q9D8B1 262 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Rpl7l1Q9D8M4 246 aaKnown RBP11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Mlf1Q9QWV4 267 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Six6Q9QZ28 246 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 MvkQ9R008 395 aa11.61□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 6430628N08RikA0A0U1RQ45 177 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 4931422A03RikA2BHN9 113 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Mettl11bB2RXM4 283 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr623E9Q382 317 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Prr23a1G3UW32 258 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Igh-3P01867 404 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Scd2P13011 358 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Il1r1P13504 576 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 GrnP28798 589 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Rab3cP62823 227 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Lrrc52Q5M8M9 314 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Slc25a26Q5U680 274 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Oxgr1Q6IYF8 337 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Gpr173Q6PI62 373 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Smim12Q78RX3 92 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Comtd1Q8BIG7 262 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Nadk2Q8C5H8 452 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Vmn1r8Q8R2C2 303 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr1495Q8VEZ4 319 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Defb8Q91V82 60 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Atp5sQ9CRA7 200 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Znf593Q9DB42 134 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Gabrg1Q9R0Y8 465 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Cacna1gQ5SUF7 2381 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Igkv6-23A0A140T8N5 115 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Tmem156A0A1D5RLR8 321 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Gm17677B3GLJ5 116 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr1348F6VB59 318 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 IfnabL7MTU6 190 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 NrasP08556 189 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 RrasP10833 218 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Pou2f1P25425 770 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 PtgirP43252 415 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Galr1P56479 348 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 SelenopP70274 380 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Rnft2Q3UF64 445 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Lin54Q571G4 749 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Ubqln3Q8C5U9 658 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Henmt1Q8CAE2 395 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Sulf2Q8CFG0 875 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Nupl2Q8CIC2 420 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Vmn1r183Q8K3N5 305 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Vmn1r73Q8R293 303 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Slc6a8Q8VBW1 640 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr361Q8VF16 322 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Olfr134Q8VG95 312 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Tmem19Q91W52 336 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 NosipQ9D6T0 301 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Klrc3Q9QXN7 221 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 TsnaxQ9QZE7 290 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Hey1Q9WV93 299 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 S1pr3Q9Z0U9 378 aa11.6□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Dgat2l6A2ADU8 337 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Arxes1C0HK79 180 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Arxes2C0HK80 180 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Gm3685J3QPP2 205 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 AF067061O70616 171 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Saa2P05367 122 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Zfp27P10077 819 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Cd1d1P11609 336 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Cd1d2P11610 336 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Itga5P11688 1053 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Dusp1P28563 367 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Kcnn3P58391 732 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 UbdP63072 162 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Psg26Q4KL65 475 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Tgfbr2Q62312 592 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Spin2cQ6NVE3 257 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Zfp947Q8BIQ6 437 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Actrt3Q8BXF8 369 aa11.59□□□□□ -0.55
Pdlim5-208ENSMUST00000196220 Depp1Q8K2F3 205 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms