RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Slc25a41Q8BVN7 312 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 CcnqQ8QZR8 250 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr460Q8VF31 314 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Tmprss11dQ8VHK8 417 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Fitm1Q91V79 292 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Pot1Q91WC1 640 aaKnown RBP7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Cela3bQ9CQ52 269 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Syt7Q9R0N7 403 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Ch25hQ9Z0F5 298 aa7.88□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Obsl1D3YYU8 1804 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 SrsxB2RZI1 361 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Gm4950D3YUM8 205 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Zfp944E9PUS4 492 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr557E9Q550 322 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 DdtO35215 118 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mrpl23O35972 146 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Slc16a7O70451 484 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Wnt1P04426 370 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Nanos2P60322 136 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 N4bp2l1Q3V2Q8 238 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Slc22a14Q497L9 629 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Npy6rQ61212 371 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 OmgQ63912 440 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 SpicQ6P3D7 242 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Hsh2dQ6VYH9 334 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Cldn34b3Q80ZS5 209 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 AtcayQ8BHE3 372 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Ido2Q8R0V5 405 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Lrg1Q91XL1 342 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rap1bQ99JI6 184 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Slc46a3Q9DC26 460 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Syt6Q9R0N8 511 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 StrapQ9Z1Z2 350 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Dock1Q8BUR4 1865 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Gm14597A2CFG5 200 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Vmn1r174E9PYW5 313 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Gm10665K7N6B7 321 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 B3galt1O54904 326 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rab11aP62492 216 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Bex6Q3TZW7 114 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Sf3a2Q62203 475 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 SnrpcQ62241 159 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Tas2r107Q7M725 308 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 ErasQ7TN89 227 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 GldnQ8BMF8 549 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Gpr89aQ8BS95 455 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 B4galt7Q8R087 327 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Vmn1r193Q8R258 319 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mrps18cQ8R2L5 143 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Vmn1r42Q8VBS7 329 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 RabifQ91X96 123 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mus81Q91ZJ0 551 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Q9D4G1 230 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Enpp5Q9EQG7 477 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rcl1Q9JJT0 373 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Scgb1b15A0A087WP50 93 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 R3hdmlA2A5I3 253 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Gm13762A2ATG2 311 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mettl8A2AUU0 281 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr585E9PXW4 318 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr248E9Q1L6 309 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr69E9Q7C5 316 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 2410141K09RikK7N769 464 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Tlx3O55144 291 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Timp1P12032 205 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 DaoP18894 345 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 RpiaP47968 303 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rbp2Q08652 134 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Cib3Q0P523 160 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mfsd12Q3U481 476 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Mex3dQ3UE17 643 aaKnown RBP7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Xaf1Q5NBU8 273 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 BckdhbQ6P3A8 390 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 BC049730Q810N3 246 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Cdhr3Q8BL00 831 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 IqcjQ8BPW0 110 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Zbtb49Q8BXX2 756 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 ShfQ8CG80 238 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Vmn1r208Q8R275 308 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Degs2Q8R2F2 323 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Calhm2Q8VEC4 323 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Slc7a12Q8VIE6 465 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Trp53tg5Q9D976 238 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Lhx9Q9WUH2 397 aa7.87□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr1338A2ACY7 313 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr773F6VS78 311 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Tgfb1P04202 390 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Msx1P13297 303 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Selenbp1P17563 472 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 AhsgP29699 345 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rab3dP35276 219 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Clpsl2Q3UW21 102 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Znf629Q6A085 867 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Olfr1344Q7TQV3 321 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Actbl2Q8BFZ3 376 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Zfp9Q8BIS1 454 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Klk14Q8CGR5 250 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Entpd8Q8K0L2 497 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Rab38Q8QZZ8 211 aa7.86□□□□□ -1.15
Col28a1-201ENSMUST00000115537 Nfam1Q8R4V1 264 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms