RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Scgb1b30A2BH64 92 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Esp15A8R0U8 85 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Sult6b2B7ZWN4 290 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr250E9PV37 331 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm8126E9Q1N7 198 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Lipo5F6QKH6 233 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 H2-T10F6T1I5 379 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Slc17a3G3UWD9 498 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 PtcraP0C6B2 199 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Tacr3P47937 452 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 6430531B16RikQ3V2J1 307 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Thap4Q6P3Z3 569 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Sema6dQ76KF0 1073 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Rnps1Q99M28 305 aaKnown RBP13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 SdhdQ9CXV1 159 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Rpl7l1Q9D8M4 246 aaKnown RBP13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Spta1P08032 2415 aa13.79□□□□□ -0.2
Trim39-203ENSMUST00000113706 Obp1bA2AEP0 171 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm14743A2BHD2 171 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Emg1O35130 244 aaKnown RBP13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Tcrg-V1P06325 135 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 UcnP81615 122 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr142Q60881 305 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Hes3Q61657 175 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Snrnp70Q62376 448 aaKnown RBP13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gpr173Q6PI62 373 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr890Q7TRD9 314 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr782Q7TRI2 314 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr205Q7TS37 305 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr1450Q8VF19 325 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Defb6Q91VD6 63 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 PecrQ99MZ7 303 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gpx8Q9D7B7 209 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 LitafQ9JLJ0 161 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm10112D3YWP5 117 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gsx2P31316 305 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Slc7a10P63115 530 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Vmn1r19Q8R2C7 308 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Nt5mQ8VCE6 220 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Eef1akmt1Q9CY45 214 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Arrdc2Q9D668 407 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Calm4Q9JM83 148 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Clec4dQ9Z2H6 219 aa13.78□□□□□ -0.2
Trim39-203ENSMUST00000113706 Jmjd1cQ69ZK6 2350 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Samt3A2ARK7 233 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm14597A2CFG5 200 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm42791D3YYB5 209 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm8020F6WLE9 229 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm16434J3QN10 205 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Gm3532M0QWL4 194 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Tcte3P11985 191 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 AhrP30561 848 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 2900092C05RikQ5I0V9 184 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Q8BTG6 205 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 EogtQ8BYW9 527 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 4930451G09RikQ8C5G4 195 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Slc35e4Q8K3D6 351 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Olfr1241Q8VF91 314 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Yif1aQ91XB7 293 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Sgo1Q9CXH7 517 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Arfgef3Q3UGY8 2170 aa13.77□□□□□ -0.2
Trim39-203ENSMUST00000113706 Eif4e1bQ3UTA9 244 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Bbs12Q5SUD9 708 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Tgfbr2Q62312 592 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Dact2Q7TN08 757 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Sult1c1Q80VR3 304 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 TMEM229BQ8BFQ2 167 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Lmf2Q8C3X8 702 aaKnown RBP13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Katnal1Q8K0T4 488 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Depp1Q8K2F3 205 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gtf2f2Q8R0A0 249 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1489Q8VFQ5 313 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Phf19Q9CXG9 578 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Ints12Q9D168 461 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Clcf1Q9QZM3 225 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 4931422A03RikA2BHN9 113 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Htra4A2RT60 483 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Ankrd29D3YVV3 309 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Msl3l2G3X992 371 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Tcstv3O70518 169 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Fosl2P47930 326 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Lrfn3Q8BLY3 626 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gpn1Q8VCE2 372 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1151Q8VFQ8 308 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1451Q8VFX5 310 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 Ppp1r27Q9D119 154 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 P2ry4Q9JJS7 361 aa13.77□□□□□ -0.21
Trim39-203ENSMUST00000113706 FryE9Q8I9 3020 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 H2-M1F7CXU4 344 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm9125P0DMR6 365 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 RrasP10833 218 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Pou2f1P25425 770 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Gm11110Q3U4K9 109 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Klf3Q60980 344 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Olfr1477Q7TQQ7 315 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Galnt6Q8C7U7 622 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Atg5Q99J83 275 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 1700025F22RikQ9D9Y7 111 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Eif3fQ9DCH4 361 aa13.76□□□□□ -0.21
Trim39-203ENSMUST00000113706 Chrm2Q9ERZ4 466 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms