RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Siglec5Q920G3 569 aa7.96□□□□□ -1.13
Clcn3-202ENSMUST00000056508 PecrQ99MZ7 303 aa7.96□□□□□ -1.13
Clcn3-202ENSMUST00000056508 Mrpl57Q9CQF8 102 aaKnown RBP7.96□□□□□ -1.13
Clcn3-202ENSMUST00000056508 Plxdc2Q9DC11 530 aa7.96□□□□□ -1.13
Clcn3-202ENSMUST00000056508 Slc30a7Q9JKN1 378 aa7.96□□□□□ -1.13
Clcn3-202ENSMUST00000056508 Vmn1r3A2AMT7 306 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm6880A3KG45 208 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 EXOC1LB9EK06 172 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Daw1D3Z7A5 415 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cilp2D3Z7H8 1162 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Ebf2O08792 575 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Fgf10O35565 209 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Oprd1P32300 372 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Lsm6P62313 80 aaKnown RBP7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Ppp2caP63330 309 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 FrzbP97401 323 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gpr55Q3UJF0 327 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Lclat1Q3UN02 376 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Spata46Q4FZF2 204 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Hepacam2Q4VAH7 463 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 CalcrQ60755 533 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Znf260Q62513 407 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 LcorQ6ZPI3 433 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 BB014433Q8C5R5 389 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Tmem163Q8C996 288 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Slc22a12Q8CFZ5 553 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 KmoQ91WN4 479 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 ProzQ9CQW3 399 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Slc25a27Q9D6D0 322 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Tdp2Q9JJX7 370 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Lhx2Q9Z0S2 406 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Trav16A0A075B653 116 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Fcgr4A0A0B4J1G0 249 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm10358A0A1D5RLD8 333 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Zfp715G3X9T1 886 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 E030030I06RikJ3QML9 246 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm8024L7N2E0 100 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Ifna2P01573 190 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cyb5aP56395 134 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 BC030870Q3V2G4 71 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Il11ra1Q64385 432 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 AdoQ6PDY2 256 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr93Q6UAH1 312 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr429Q7TRW1 312 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cxcr1Q810W6 351 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm5111Q8C9M4 190 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Zfyve21Q8VCM3 234 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 TapbpQ9R233 465 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm5890A0A140LI04 305 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm765B2RVL9 189 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm10112D3YWP5 117 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Igh-1aP01865 398 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Hist1h1dP43277 221 aaKnown RBP7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Tcf15Q60756 195 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr1134Q7TR43 312 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gatd1Q8BFQ8 220 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 PgpQ8CHP8 321 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Tmem125Q8CHQ6 216 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cd276Q8VE98 316 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr649Q8VGW1 312 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr572Q8VGZ3 318 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Q9CR34 168 aa7.96□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm28372A0A087WNV0 220 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Prob1A0A087WR45 1010 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Trbv17A0A140T8P8 114 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr282A1L1B4 308 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Lcn11A2BHR2 178 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Vmn2r79E9Q067 851 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm20518E9Q548 580 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm21994F6T2D2 329 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Vmn1r126L7N2C8 321 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Tacr3P47937 452 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Isl1P61372 349 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr145Q60882 310 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Sp4Q62445 782 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr458Q8VF80 313 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr1201Q8VGF5 307 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 H2al1mQ9DAD9 105 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Fgf20Q9ESL9 211 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Bcl3Q9Z2F6 448 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Myom2Q14BI5 1463 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Mgst2A2RST1 147 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 E130114P18RikF6S0S7 154 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Gm20403G3UYB0 123 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Olfr92L7N475 312 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cd14P10810 366 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Slc6a9P28571 692 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 SftpdP50404 374 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 ElnP54320 860 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 StumQ0VBF8 141 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Taf6Q62311 678 aaKnown RBP7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Defa17Q64016 82 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Cd200r1lQ6XJV6 249 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Sgpp2Q810K3 354 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Slc38a9Q8BGD6 560 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Znf385bQ8BXJ8 482 aaKnown RBP7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 MmdQ9CQY7 238 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Subh2bvQ9D9Z7 123 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Plekha3Q9ERS4 297 aa7.95□□□□□ -1.14
Clcn3-202ENSMUST00000056508 Rps6kb2Q9Z1M4 485 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms