RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SIGIRRQ6IA17 410 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RAB12Q6IQ22 244 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 Q6P435 159 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 PEG10Q86TG7 708 aaKnown RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 CCDC190Q86UF4 302 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 TEX29Q8N6K0 151 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 OR5T2Q8NGG2 359 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 ANGPTL6Q8NI99 470 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RAB3CQ96E17 227 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 TIMD4Q96H15 378 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 ARHGAP5-AS1Q96IT6 56 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 NEDD4LQ96PU5 975 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 NUDT16L1Q9BRJ7 211 aaKnown RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 SPACA1Q9HBV2 294 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 DIABLOQ9NR28 239 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RCC2Q9P258 522 aaKnown RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 PCDHB10Q9UN67 800 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 TRAV18A0A075B6X5 111 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TRAV24A0A0B4J272 114 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 IGHV4-61A0A0C4DH41 118 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 A0A1B0GW55 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 VWC2LB2RUY7 222 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 H3BUI4 141 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 SLC33A1O00400 549 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MFNGO00587 321 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TMPRSS2O15393 492 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L2P0CJ85 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L3P0CJ86 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L4P0CJ87 422 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L5P0CJ88 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L6P0CJ89 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L7P0CJ90 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 GNB3P16520 340 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 PRDX2P32119 198 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MDH2P40926 338 aaKnown RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 ETV6P41212 452 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MNDAP41218 407 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 GABRA2P47869 451 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM50BP56557 158 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM33P57088 247 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 LSAMPQ13449 338 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 IL18Q14116 193 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 PAN3Q58A45 887 aaKnown RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 PLAC9Q5JTB6 97 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 HIST2H2BDQ6DRA6 164 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4L9Q6RFH8 374 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 FAM131AQ6UXB0 335 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 BAIAP2L2Q6UXY1 529 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 C6orf201Q7Z4U5 140 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 SNX29P2Q8IUI4 249 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MUC20Q8N307 709 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 CD177Q8N6Q3 437 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 FAM216BQ8N7L0 139 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 SUMF2Q8NBJ7 301 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 RAB1CQ92928 201 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 CYYR1Q96J86 154 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 GAFA1Q96PS6 74 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DPCDQ9BVM2 203 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 IFT22Q9H7X7 185 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM165Q9HC07 324 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 DUX4Q9UBX2 424 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 MRPS7Q9Y2R9 242 aaKnown RBP7.81□□□□□ -1.16
PHGDH-228ENST00000641847 V9GYH0 126 aa7.81□□□□□ -1.16
PHGDH-228ENST00000641847 A0A0G2JMP0 313 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 A0A0X1KG70 313 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM82A0PJX8 343 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM235A6NFC5 223 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 FABP12A6NFH5 140 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 FSTL3O95633 263 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 AMY2BP19961 511 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 FUT3P21217 361 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 OR3A1P47881 315 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ATXN7L3Q14CW9 347 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF260Q3ZCT1 412 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 AWAT1Q58HT5 328 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 OLFML2AQ68BL7 652 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 PYHIN1Q6K0P9 492 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF788Q6ZQV5 615 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 Q6ZTK2 550 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 SPICQ8N5J4 248 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ASCC1Q8N9N2 400 aaKnown RBP7.8□□□□□ -1.16
PHGDH-228ENST00000641847 OR4M2Q8NGB6 313 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 NEK7Q8TDX7 302 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 S100ZQ8WXG8 99 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 ST8SIA4Q92187 359 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 DYRK2Q92630 601 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 SDSLQ96GA7 329 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 CCL13Q99616 98 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 SULT4A1Q9BR01 284 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM246Q9BRR3 403 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 PECRQ9BY49 303 aa7.8□□□□□ -1.16
PHGDH-228ENST00000641847 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms