RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 IL13RA2Q14627 380 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 KIR2DS1Q14954 304 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 FAM214BQ7L5A3 538 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 FAM185AQ8N0U4 392 aa14.55□□□□□ -0.08
PHGDH-211ENST00000641213 MRPL30Q8TCC3 161 aaKnown RBP14.55□□□□□ -0.08
PHGDH-211ENST00000641213 FBXO9Q9UK97 447 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-211ENST00000641213 IGKV1-6A0A0C4DH72 117 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 RAB19A4D1S5 217 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 J3QT63 122 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 MRPL49Q13405 166 aaKnown RBP14.54□□□□□ -0.08
PHGDH-211ENST00000641213 GUSBP1Q15486 140 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 C20orf204Q6ZNR8 217 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 OR52M1Q8NGK5 317 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 SECTM1Q8WVN6 248 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 RDH5Q92781 318 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 OR2J1Q9GZK6 312 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 RIMS4Q9H426 269 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-211ENST00000641213 PLEKHA2Q9HB19 425 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 TAF9BQ9HBM6 251 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 CDH20Q9HBT6 801 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 TUSC2O75896 110 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 SLC34A2O95436 690 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 RCC1P18754 421 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-211ENST00000641213 EIF5AP63241 154 aaKnown RBP14.54□□□□□ -0.08
PHGDH-211ENST00000641213 BTN1A1Q13410 526 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 GABRA6Q16445 453 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 UQCC3Q6UW78 93 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 MEX3BQ6ZN04 569 aaKnown RBP14.54□□□□□ -0.08
PHGDH-211ENST00000641213 ZNF818PQ6ZRF7 136 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 SLC35G3Q8N808 338 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 RTL8AQ9BWD3 113 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 TMEM222Q9H0R3 208 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 FBXL17Q9UF56 701 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 GLS2Q9UI32 602 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 TMED3Q9Y3Q3 217 aa14.54□□□□□ -0.08
PHGDH-211ENST00000641213 LOC400499M0QZD8 3231 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 TRBV6-6A0A0A6YYG2 114 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 TRAV17A0A0B4J275 112 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 IGKV1D-13A0A0B4J2D9 117 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 E5RGE8 158 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 APOC3P02656 99 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 CTXN2P0C2S0 81 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 IGKV1-13P0DP09 117 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 TMEM33P57088 247 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 ERVS71-1P61550 626 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 RND3P61587 244 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 SPIN3Q5JUX0 258 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 TMEM268Q5VZI3 342 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 Q6ZT83 130 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 WDR86Q86TI4 376 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 TBC1D26Q86UD7 250 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 ZNF565Q8N9K5 539 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 IFT22Q9H7X7 185 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 DLL3Q9NYJ7 618 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 NSG2Q9Y328 171 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 GPR31O00270 319 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 AQP7O14520 342 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 SIGLEC5O15389 551 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 GLAP06280 429 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 FAM76BQ5HYJ3 339 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 LPAR3Q9UBY5 353 aa14.53□□□□□ -0.08
PHGDH-211ENST00000641213 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-211ENST00000641213 GAPDHP04406 335 aaKnown RBP14.52□□□□□ -0.09
PHGDH-211ENST00000641213 SRPXP78539 464 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 MST1LQ2TV78 715 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 ALKBH6Q3KRA9 238 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 Q6P435 159 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 ZNF880Q6PDB4 577 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 INO80CQ6PI98 192 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-211ENST00000641213 GAPTQ8N292 157 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 CNEP1R1Q8N9A8 125 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 SCCPDHQ8NBX0 429 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 ARL11Q969Q4 196 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 USB1Q9BQ65 265 aaKnown RBP14.52□□□□□ -0.09
PHGDH-211ENST00000641213 RHOFQ9HBH0 211 aa14.52□□□□□ -0.09
PHGDH-211ENST00000641213 CACNA1GO43497 2377 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 LRP5LA4QPB2 252 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 EIF5AL1Q6IS14 154 aaKnown RBP14.51□□□□□ -0.09
PHGDH-211ENST00000641213 IGF2-ASQ6U949 168 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 PCSK4Q6UW60 755 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 OR4D5Q8NGN0 318 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 SLC25A40Q8TBP6 338 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 NARS2Q96I59 477 aaKnown RBP14.51□□□□□ -0.09
PHGDH-211ENST00000641213 TMEM56Q96MV1 263 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 SMIM3Q9BZL3 60 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 ZFP57Q9NU63 452 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 UBE2J1Q9Y385 318 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-211ENST00000641213 TMEM56-RWDD3S4R434 201 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 INTS1Q8N201 2190 aaKnown RBP14.51□□□□□ -0.09
PHGDH-211ENST00000641213 DEGS1O15121 323 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 ST8SIA3O43173 380 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 JTBO76095 146 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 RAC2P15153 192 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 KIR2DL2P43627 348 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-211ENST00000641213 UCP2P55851 309 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 GTF3C1Q12789 2109 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 DEFB109BQ30KR1 87 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 ATRAIDQ6UW56 229 aa14.51□□□□□ -0.09
PHGDH-211ENST00000641213 C9orf106Q8NAJ2 232 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms