RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NEK7Q8TDX7 302 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 DYRK2Q92630 601 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 WDFY2Q96P53 400 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 PCGF1Q9BSM1 259 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 PEX16Q9Y5Y5 336 aa10.86□□□□□ -0.67
GTF3A-209ENST00000640289 IGHV3OR16-10A0A075B7F0 116 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 UBE2QL1A1L167 161 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 SOCS1O15524 211 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 PDCD6O75340 191 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 TOX4O94842 621 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 FUT3P21217 361 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 CHATP28329 748 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 VEGFCP49767 419 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 METTL11BQ5VVY1 283 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 RSBN1Q5VWQ0 802 aaPredicted RBP10.85□□□□□ -0.67
GTF3A-209ENST00000640289 C6orf201Q7Z4U5 140 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 OR5H6Q8NGV6 325 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 URM1Q9BTM9 101 aaKnown RBP10.85□□□□□ -0.67
GTF3A-209ENST00000640289 BEX2Q9BXY8 128 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 SPACA1Q9HBV2 294 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 SIRT7Q9NRC8 400 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 RAB22AQ9UL26 194 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 KPTNQ9Y664 436 aa10.85□□□□□ -0.67
GTF3A-209ENST00000640289 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 MEIKINA0A087WXM9 373 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 TRAV39A0A0B4J263 110 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 hADV38S2A0JD32 116 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 ODAMA1E959 279 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 FOXI3A8MTJ6 420 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-209ENST00000640289 MCRIP1C9JLW8 97 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-209ENST00000640289 RANBP1P43487 201 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 KCNJ3P48549 501 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 DLX6P56179 175 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 MEF2CQ06413 473 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-209ENST00000640289 SPCS2Q15005 226 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-209ENST00000640289 VMO1Q7Z5L0 202 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 FAM89BQ8N5H3 189 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 C11orf42Q8N5U0 333 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 SLC25A46Q96AG3 418 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 UPRTQ96BW1 309 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 DMRTB1Q96MA1 342 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 SULT4A1Q9BR01 284 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 BARHL1Q9BZE3 327 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 ETAA1Q9NY74 926 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 LINC00312Q9Y6C7 94 aa10.84□□□□□ -0.67
GTF3A-209ENST00000640289 TRAV40A0A0B4J280 105 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 FUOMA2VDF0 154 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 M0R1W7 72 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 CRLF1O75462 422 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 FSHBP01225 129 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 IGHV4-38-2P0DP08 117 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 RAB6AP20340 208 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 HNF1AP20823 631 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 SRP14P37108 136 aaKnown RBP10.83□□□□□ -0.68
GTF3A-209ENST00000640289 GLP1RP43220 463 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 TMBIM6P55061 237 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 TMEM50BP56557 158 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 RBM39Q14498 530 aaKnown RBP10.83□□□□□ -0.68
GTF3A-209ENST00000640289 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 USP43Q70EL4 1123 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 PDZD9Q8IXQ8 264 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 CMTM4Q8IZR5 234 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 RAB2BQ8WUD1 216 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 PTX4Q96A99 478 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 POM121Q96HA1 1249 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF714Q96N38 554 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 FAAP24Q9BTP7 215 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 PLEKHJ1Q9NW61 149 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 CDC42EP3Q9UKI2 254 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
GTF3A-209ENST00000640289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.83□□□□□ -0.685e-14■■■■■ 28.5
GTF3A-209ENST00000640289 TRGV10A0A0A0MS01 117 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 A0A1W2PPH5 198 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 TMEM30CPA0ZSE6 113 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 MMP23AO75900 390 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF728P0DKX0 622 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 HOXB4P17483 251 aaPredicted RBP10.82□□□□□ -0.68
GTF3A-209ENST00000640289 PAX5Q02548 391 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 KLRD1Q13241 179 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 BLMHQ13867 455 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 PLAC9Q5JTB6 97 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 SLC35E4Q6ICL7 350 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF782Q6ZMW2 699 aaPredicted RBP10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF497Q6ZNH5 498 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 Q6ZTK2 550 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms