RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SCGB1C2P0DMR2 95 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 CCL5P13501 91 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 GABRG2P18507 467 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 RPL27AP46776 148 aaKnown RBP-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 SERPINB8P50452 374 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 ACTR3P61158 418 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 UBE2NLQ5JXB2 153 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 CLLU1OSQ5K130 101 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 PRAMEF20Q5VT98 475 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 GKN2Q86XP6 184 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 OR5AR1Q8NGP9 310 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 SCGB1C1Q8TD33 95 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 KCTD4Q8WVF5 259 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 DYNLL2Q96FJ2 89 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 FAM111AQ96PZ2 611 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 FARSBQ9NSD9 589 aaKnown RBP-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 C14orf166Q9Y224 244 aaKnown RBP-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 AP3M1Q9Y2T2 418 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 WASHC3Q9Y3C0 194 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 FAM215AQ9Y5M1 114 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 WDR19Q8NEZ3 1342 aa-1.99□□□□□ -2.73
LMBR1-222ENST00000638959 TRAV26-1A0A087WT03 109 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 HMSDA8MTL9 139 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 LINC01619G3V211 115 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 AIM2O14862 343 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 ORC5O43913 435 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 DHRS3O75911 302 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 AGTP01019 485 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 ZNF728P0DKX0 622 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 HLA-DPA1P20036 260 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 AQP4P55087 323 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 MMDQ15546 238 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2□□□□□ -2.73
LMBR1-222ENST00000638959 MARCH3Q86UD3 253 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 KRTCAP2Q8N6L1 136 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 OR11H1Q8NG94 326 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 SMIM8Q96KF7 97 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 ZNF436Q9C0F3 470 aaPredicted RBP-2□□□□□ -2.73
LMBR1-222ENST00000638959 OR51M1Q9H341 326 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 PRO0628Q9UI54 55 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 PTBP2Q9UKA9 531 aaKnown RBP-2□□□□□ -2.73
LMBR1-222ENST00000638959 YLPM1P49750 1951 aaKnown RBP-2□□□□□ -2.73
LMBR1-222ENST00000638959 LRP1BQ9NZR2 4599 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 SETD5Q9C0A6 1442 aa-2□□□□□ -2.73
LMBR1-222ENST00000638959 CITO14578 2027 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 SMCO2A6NFE2 343 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 SNTNA6NMZ2 147 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 M0QXV9 152 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 UPK1BO75841 260 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 DIRAS3O95661 229 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 AK1P00568 194 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 ZNF3P17036 446 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 PRKACAP17612 351 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 SPINT3P49223 89 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 OR2B8PP59922 312 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 CEACAM21Q3KPI0 293 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 C9orf163Q8N9P6 203 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 OR4K2Q8NGD2 314 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 SGMS2Q8NHU3 365 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 CAPSLQ8WWF8 208 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 ASZ1Q8WWH4 475 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 AQP3Q92482 292 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 QKIQ96PU8 341 aaKnown RBP eCLIP-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 PLEKHA1Q9HB21 404 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 NOS1P29475 1434 aa-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 CHD3Q12873 2000 aaKnown RBP-2.01□□□□□ -2.73
LMBR1-222ENST00000638959 NAV1Q8NEY1 1877 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 IGHV3OR15-7A0A075B7D8 119 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 TRAV14DV4A0A0A6YYC5 116 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 TRGV5A0A0B4J1U4 118 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 IGKV1-12A0A0C4DH73 117 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 LOC389332A0A1B0GUA5 103 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 H7C0C1 242 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 ITGB1BP1O14713 200 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 IGKV1D-12P01611 117 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 SLC25A16P16260 332 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 RAB5AP20339 215 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 SLC1A1P43005 524 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 ATP5OP48047 213 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 CAMLGP49069 296 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 AP1S2P56377 157 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 TAS2R20P59543 309 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 CLEC19AQ6UXS0 136 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 IQCKQ8N0W5 287 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 OR5K2Q8NHB8 316 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 PGLYRP3Q96LB9 341 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 ANAPC13Q9BS18 74 aa-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 POLR3AO14802 1390 aaPredicted RBP-2.02□□□□□ -2.73
LMBR1-222ENST00000638959 MUC4Q99102 2169 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 NEBP20929 6669 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 RNF103-CHMP3A0A140T963 221 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 PGPA6NDG6 321 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 ARGFXA6NJG6 315 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 C9J4A7 227 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 SLC9A3R1O14745 358 aaPredicted RBP-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 DENRO43583 198 aaKnown RBP-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 RALBP11234 206 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 IFITM1P13164 125 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 AKR1C2P52895 323 aa-2.03□□□□□ -2.73
LMBR1-222ENST00000638959 FAM43BQ6ZT52 329 aaPredicted RBP-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms