RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 GPR35Q9HC97 309 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 A0A1B0GV50 99 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 TK1P04183 234 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 P04436 131 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 HEPN1Q6WQI6 88 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 PRDM14Q9GZV8 571 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 RBFOX3A6NFN3 312 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 OR2C1O95371 312 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 NPBWR2P48146 333 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 CLDN15P56746 228 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 HLA-BQ31612 363 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 SELENOHQ8IZQ5 122 aaKnown RBP17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 TMEM252Q8N6L7 170 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 RYDENQ9NUL5 291 aaKnown RBP17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 CLEC18AA5D8T8 446 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 ZNF724A8MTY0 619 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 GPR37O15354 613 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 VAMP2P63027 116 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 HIKESHIQ53FT3 197 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 SPIN3Q5JUX0 258 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 SUMF1Q8NBK3 374 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 CLEC18CQ8NCF0 446 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 OR10D3Q8NH80 312 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 ADGRG7Q96K78 797 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 RARRES2Q99969 163 aa17.31■□□□□ 0.36
SYNGAP1-227ENST00000638142 A0A0G2JMM0 328 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 A0A1W2PPB8 328 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 A0A1W2PRS3 328 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 KIR3DP1A8MWS1 328 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 ZNF587BE7ETH6 402 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 SSSCA1O60232 199 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 MMP7P09237 267 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 MMP9P14780 707 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 FOXO1Q12778 655 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 SPSB3Q6PJ21 355 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 TMEM171Q8WVE6 324 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 Q9N2K0 584 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 FSCN3Q9NQT6 498 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 KIAA1456Q9P272 454 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 PUS1Q9Y606 427 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 PI4KAP42356 2102 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 BAXQ07812 192 aa17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 GNPNAT1Q96EK6 184 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-227ENST00000638142 ZNF732B4DXR9 585 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 ADAM20O43506 726 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 NAPSAO96009 420 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 RAB2AP61019 212 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 ZFP62Q8NB50 900 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 TOLLIPQ9H0E2 274 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 PROB1E7EW31 1015 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 HOXA5P20719 270 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 OMGP23515 440 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 FOLR3P41439 243 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 CCL20P78556 96 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 NRN1LQ496H8 165 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 NMSQ5H8A3 153 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 ZNF818PQ6ZRF7 136 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 COLCA1Q6ZS62 124 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 SAXO1Q8IYX7 474 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 OR5C1Q8NGR4 320 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 GGACTQ9BVM4 153 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 DMRT1Q9Y5R6 373 aa17.29■□□□□ 0.36
SYNGAP1-227ENST00000638142 CDRT15L2A8MXV6 281 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 WRBO00258 174 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 VDAC1P21796 283 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 UCP1P25874 307 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 ID3Q02535 119 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 TRA2AQ13595 282 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 CXorf66Q5JRM2 361 aaPredicted RBP17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 GAPTQ8N292 157 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 MUCL1Q96DR8 90 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 BCL2L14Q9BZR8 327 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 WDR87Q6ZQQ6 2873 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 YKT6O15498 198 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 CCL4P13236 92 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 FGF12P61328 243 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 NCMAPQ5T1S8 102 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 SLAMF9Q96A28 289 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 MAGT1Q9H0U3 335 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 GLRX2Q9NS18 164 aa17.28■□□□□ 0.36
SYNGAP1-227ENST00000638142 KIR2DS1A0A191URI9 304 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 CYTIPO60759 359 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 TUSC2O75896 110 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 BCL3P20749 454 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 KIR2DS4P43632 304 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 KIR2DS1Q14954 304 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 SP5Q6BEB4 398 aaPredicted RBP17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 BATF2Q8N1L9 274 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 CPEB3Q8NE35 698 aaKnown RBP17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 SIGLEC12Q96PQ1 595 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 RFNGQ9Y644 331 aa17.27■□□□□ 0.36
SYNGAP1-227ENST00000638142 LRRC3CA6NJW4 275 aa17.27■□□□□ 0.35
SYNGAP1-227ENST00000638142 SLC22A20A6NK97 555 aa17.27■□□□□ 0.35
SYNGAP1-227ENST00000638142 CTXN2P0C2S0 81 aa17.27■□□□□ 0.35
SYNGAP1-227ENST00000638142 RFPL3SP0C7P2 107 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms