RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 VSIG10L2P0DP72 767 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 IGFBP3P17936 291 aaPredicted RBP14.25□□□□□ -0.13
PNKP-230ENST00000638016 PTGFRP43088 359 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 GLP1RP43220 463 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 RSU1Q15404 277 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 TMEM95Q3KNT9 176 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 C8orf59Q8N0T1 100 aaPredicted RBP14.25□□□□□ -0.13
PNKP-230ENST00000638016 CHST4Q8NCG5 386 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 OR51T1Q8NGJ9 327 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 LEAP2Q969E1 77 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 OR14A2Q96R54 314 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 CDCA4Q9BXL8 241 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 GAL3ST2Q9H3Q3 398 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 ING4Q9UNL4 249 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 F2RL2O00254 374 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 SERPINA2P20848 420 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 BDKRB2P30411 391 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 ZNF93P35789 620 aaPredicted RBP14.24□□□□□ -0.13
PNKP-230ENST00000638016 PPP3R1P63098 170 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 DEFA6Q01524 100 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 LTC4SQ16873 150 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 MINOS1Q5TGZ0 78 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 RSBN1Q5VWQ0 802 aaPredicted RBP14.24□□□□□ -0.13
PNKP-230ENST00000638016 ASCL4Q6XD76 172 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 LYG1Q8N1E2 194 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 BPIFB6Q8NFQ5 453 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 OR2T6Q8NHC8 308 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 FAM110DQ8TAY7 271 aaPredicted RBP14.24□□□□□ -0.13
PNKP-230ENST00000638016 FBLIM1Q8WUP2 373 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 ZNF184Q99676 751 aaPredicted RBP14.24□□□□□ -0.13
PNKP-230ENST00000638016 RANBP3Q9H6Z4 567 aaPredicted RBP14.24□□□□□ -0.13
PNKP-230ENST00000638016 RAB18Q9NP72 206 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 TMEM138Q9NPI0 162 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 C8orf4Q9NR00 106 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 SERTAD4Q9NUC0 356 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 TAS2R3Q9NYW6 316 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 PSORS1C1Q9UIG5 152 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 MINOS1-NBL1R4GNA1 71 aa14.24□□□□□ -0.13
PNKP-230ENST00000638016 MEIKINA0A087WXM9 373 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 IGLV1-47P01700 117 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 ALDOBP05062 364 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 CGB3P0DN86 165 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 CGB7P0DN87 165 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 NFYBP25208 207 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 HTR1DP28221 377 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 BLCAPP62952 87 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 RIPK1Q13546 671 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 HERPUD1Q15011 391 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 LIAT1Q6ZQX7 453 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 Q8NFD4 153 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 MRGPRDQ8TDS7 321 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 SGCDQ92629 289 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 KIRREL1Q96J84 757 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 MMP27Q9H306 513 aa14.23□□□□□ -0.13
PNKP-230ENST00000638016 CHCHD3Q9NX63 227 aaKnown RBP14.23□□□□□ -0.13
PNKP-230ENST00000638016 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 ZNF729A6NN14 1252 aaPredicted RBP14.22□□□□□ -0.13
PNKP-230ENST00000638016 GEMIN2O14893 280 aaKnown RBP14.22□□□□□ -0.13
PNKP-230ENST00000638016 PIN1P1O15428 100 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 CD34P28906 385 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 RBM11P57052 281 aaKnown RBP14.22□□□□□ -0.13
PNKP-230ENST00000638016 RBM39Q14498 530 aaKnown RBP14.22□□□□□ -0.13
PNKP-230ENST00000638016 INSL4Q14641 139 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 Q499Y3 187 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 SUMF2Q8NBJ7 301 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 RFESDQ8TAC1 157 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 UBALD1Q8TB05 177 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 NRG4Q8WWG1 115 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 CALYQ9NYX4 217 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 DPM3Q9P2X0 92 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 ST3GAL6Q9Y274 331 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 HSPE1-MOB4S4R3N1 261 aa14.22□□□□□ -0.13
PNKP-230ENST00000638016 TRBV5-7A0A0A0MS05 114 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 KBTBD11-OT1A0A1B0GTJ5 212 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 EFCAB10A6NFE3 127 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 SH2D7A6NKC9 451 aaPredicted RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 SSTR5P35346 364 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 DYNLT3P51808 116 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 BDH1Q02338 343 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 HLA-DRB5Q30154 266 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 SLC22A6Q4U2R8 563 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 FAM53AQ6NSI3 398 aaPredicted RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 Q6ZTK2 550 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 C1QL4Q86Z23 238 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 Q8N2B8 174 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 OSR2Q8N2R0 312 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 STX19Q8N4C7 294 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 OR4D6Q8NGJ1 314 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 TFAP2CQ92754 450 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 MUL1Q969V5 352 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 CPNE2Q96FN4 548 aaPredicted RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 DPCDQ9BVM2 203 aaPredicted RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 METTL9Q9H1A3 318 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 FKBP14Q9NWM8 211 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 CNOT2Q9NZN8 540 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms