RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 LRRC46Q96FV0 321 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 ZNF629Q9UEG4 869 aaPredicted RBP10.37□□□□□ -0.75
CLN8-212ENST00000637083 AMDHD2Q9Y303 409 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 POMT1Q9Y6A1 747 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 TUSC2O75896 110 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 GNRHRP30968 328 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TMEM268Q5VZI3 342 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 OR2T2Q6IF00 324 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 OR2A2Q6IF42 318 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 MOB1BQ7L9L4 216 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 SPAG16Q8N0X2 631 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 BATF2Q8N1L9 274 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 OR51I2Q9H344 312 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 PARP11Q9NR21 331 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 FAM212BQ9NTI7 297 aaPredicted RBP10.36□□□□□ -0.75
CLN8-212ENST00000637083 TREM2Q9NZC2 230 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 COQ3Q9NZJ6 369 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 FAM186AA6NE01 2351 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TSPAN4O14817 238 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 DEGS1O15121 323 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 ATG12O94817 140 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 ZNF205O95201 554 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 SCTP09683 121 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TUBG1P23258 451 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 CA6P23280 308 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 KCNJ3P48549 501 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 GABRA6Q16445 453 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 MEX3BQ6ZN04 569 aaKnown RBP10.36□□□□□ -0.75
CLN8-212ENST00000637083 Q6ZPA2 131 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 FAM214BQ7L5A3 538 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 SLC35G3Q8N808 338 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 SECTM1Q8WVN6 248 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 IL22RA2Q969J5 263 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 KIRREL1Q96J84 757 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TSNAXQ99598 290 aaKnown RBP10.36□□□□□ -0.75
CLN8-212ENST00000637083 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
CLN8-212ENST00000637083 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 CRIM1Q9NZV1 1036 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 ASPMQ8IZT6 3477 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
CLN8-212ENST00000637083 ZNF407Q9C0G0 2248 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 TRAV17A0A0B4J275 112 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 MED6O75586 246 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 SEC11BP0C7V7 166 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 FTH1P19P0C7X4 201 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 RAC2P15153 192 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 ZNF14P17017 642 aaPredicted RBP10.35□□□□□ -0.75
CLN8-212ENST00000637083 HOXC12P31275 282 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 CCL11P51671 97 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 NUBP1P53384 320 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 F2RL1P55085 397 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 PPP1CBP62140 327 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 ZNF273Q14593 569 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
CLN8-212ENST00000637083 ZNF880Q6PDB4 577 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 FIP1L1Q6UN15 594 aaKnown RBP10.35□□□□□ -0.75
CLN8-212ENST00000637083 IGFL2Q6UWQ7 119 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 OR4D5Q8NGN0 318 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 OR10J5Q8NHC4 309 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 SNIP1Q8TAD8 396 aaKnown RBP10.35□□□□□ -0.75
CLN8-212ENST00000637083 MRPL30Q8TCC3 161 aaKnown RBP10.35□□□□□ -0.75
CLN8-212ENST00000637083 SARAFQ96BY9 339 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 TP53RKQ96S44 253 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 CLCF1Q9UBD9 225 aa10.35□□□□□ -0.75
CLN8-212ENST00000637083 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 SMPD2O60906 423 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 ZNF44P15621 663 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 NKX2-1P43699 371 aaPredicted RBP10.34□□□□□ -0.75
CLN8-212ENST00000637083 RAB5CP51148 216 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 CAV2P51636 162 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 TSC22D1Q15714 1073 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 SHEQ5VZ18 495 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 Q6ZT83 130 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 TMPRSS7Q7RTY8 843 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 DEFB124Q8NES8 71 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 DLL3Q9NYJ7 618 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 DNAJC13O75165 2243 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 URB1O60287 2271 aaKnown RBP10.34□□□□□ -0.75
CLN8-212ENST00000637083 LOC400499M0QZD8 3231 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 F8W036 122 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 AQP7O14520 342 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 HS3ST1O14792 307 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 MMP9P14780 707 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 UCP1P25874 307 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 FAM76BQ5HYJ3 339 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 IGF2-ASQ6U949 168 aa10.34□□□□□ -0.75
CLN8-212ENST00000637083 ZNF818PQ6ZRF7 136 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms