RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 SCN1BQ07699 218 aa13.25□□□□□ -0.29
CACNA1A-229ENST00000636670 PAN3Q58A45 887 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-229ENST00000636670 NR1H4Q96RI1 486 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-229ENST00000636670 VCX3AQ9NNX9 186 aa13.25□□□□□ -0.29
CACNA1A-229ENST00000636670 A0A087WXM4 84 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 TRAV24A0A0B4J272 114 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 SLC22A1O15245 554 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 OR7C1O76099 320 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 ZNF728P0DKX0 622 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 MGMTP16455 207 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 CCL3L1P16619 93 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 MYL9P24844 172 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 HTR2CP28335 458 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 RANBP1P43487 201 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 DLX6P56179 175 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 ATXN7L3Q14CW9 347 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 NEDD8Q15843 81 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 RUSC1-AS1Q66K80 236 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 TNFRSF14Q92956 283 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 COQ2Q96H96 371 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 ZNF714Q96N38 554 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 SPACA1Q9HBV2 294 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 STUB1Q9UNE7 303 aa13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-229ENST00000636670 TRAV1-2A0A0B4J238 106 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 C17orf98A8MV24 154 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 RNASEK-C17orf49H0YIS7 233 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 SLC17A2O00624 439 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 GEMIN2O14893 280 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 BPNT1O95861 308 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 FGF9P31371 208 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 ERVFRD-1P60508 538 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 KRBOX4Q5JUW0 171 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 TPRX1Q8N7U7 411 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 TSPAN14Q8NG11 270 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 C22orf15Q8WYQ4 148 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 Q96M66 194 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 GFI1Q99684 422 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 NCOR1P1Q9H4R4 102 aa13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 RCC2Q9P258 522 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-229ENST00000636670 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 ODAMA1E959 279 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 HSPB6O14558 160 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 PDCD5O14737 125 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 CRTAPO75718 401 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 CLPXO76031 633 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 PSMD7P51665 324 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 UBE2E1P51965 193 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 KLRD1Q13241 179 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 TRAPPC6BQ86SZ2 158 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 BCL6BQ8N143 479 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 C11orf42Q8N5U0 333 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 TMEM104Q8NE00 496 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 DPCDQ9BVM2 203 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 TMEM59Q9BXS4 323 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 GAL3ST2Q9H3Q3 398 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 PLGRKTQ9HBL7 147 aa13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 AK6Q9Y3D8 172 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-229ENST00000636670 TRIM64CA6NLI5 447 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 H3BUI4 141 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 VSIG8P0DPA2 414 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 GLIPR1P48060 266 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 AESQ08117 197 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 TAF9Q16594 264 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 RSBN1Q5VWQ0 802 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 C22orf42Q6IC83 251 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 OR2W3Q7Z3T1 314 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 SUMF2Q8NBJ7 301 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 KCNG3Q8TAE7 436 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 CORO2AQ92828 525 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 ZNF48Q96MX3 618 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 SELENOIQ9C0D9 397 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 BANF2Q9H503 90 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 HEXA-AS1Q9H8Q6 139 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 TXNL4BQ9NX01 149 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 TAS2R3Q9NYW6 316 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 OR6C3Q9NZP0 311 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 SSR3Q9UNL2 185 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 V9GY05 133 aa13.21□□□□□ -0.29
CACNA1A-229ENST00000636670 SHISA3A0PJX4 238 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms