RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 COQ2Q96H96 371 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 OR4C12Q96R67 309 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 S1PR3Q99500 378 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 RASL11BQ9BPW5 248 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 ALX4Q9H161 411 aaPredicted RBP13.96□□□□□ -0.17
CLN6-212ENST00000636020 IGHV1-3A0A0C4DH29 117 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 LINC01619G3V211 115 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 TNFRSF11BO00300 401 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 SH2D1BO14796 132 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 E2F6O75461 281 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 SRSF10O75494 262 aaKnown RBP13.95□□□□□ -0.18
CLN6-212ENST00000636020 GMNNO75496 209 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 OR2H2O95918 312 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 PRKACAP17612 351 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 BCL3P20749 454 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 FUT6P51993 359 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 ZNF816Q0VGE8 651 aaPredicted RBP13.95□□□□□ -0.18
CLN6-212ENST00000636020 KRBOX4Q5JUW0 171 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 HACD2Q6Y1H2 254 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 HAPLN4Q86UW8 402 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 CHCHD6Q9BRQ6 235 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
CLN6-212ENST00000636020 PRODHO43272 600 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 CCNB2O95067 398 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 IGLV1-40P01703 118 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 CSN2P05814 226 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 SOX6P35712 828 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 RIDAP52758 137 aaKnown RBP13.94□□□□□ -0.18
CLN6-212ENST00000636020 ELMOD2Q8IZ81 293 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 PGAM4Q8N0Y7 254 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 FAM110AQ9BQ89 295 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 YIPF3Q9GZM5 350 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 EFCAB1Q9HAE3 211 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 EXOSC4Q9NPD3 245 aaKnown RBP13.94□□□□□ -0.18
CLN6-212ENST00000636020 TPSG1Q9NRR2 321 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 ING3Q9NXR8 418 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 ACTR3BQ9P1U1 418 aa13.94□□□□□ -0.18
CLN6-212ENST00000636020 B2RBV5 119 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 C12orf77C9JDV5 145 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 LOC110117498-PIK3R3F6TDL0 507 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 HSD17B6O14756 317 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 IGLV1-51P01701 117 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
CLN6-212ENST00000636020 RAB9AP51151 201 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 MNAT1P51948 309 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 PITPNAQ00169 270 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 RNLSQ5VYX0 342 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 RPP25LQ8N5L8 163 aaKnown RBP13.93□□□□□ -0.18
CLN6-212ENST00000636020 MNTQ99583 582 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 NABP2Q9BQ15 211 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 DGCR6LQ9BY27 220 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 HMG20AQ9NP66 347 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 OR6C3Q9NZP0 311 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 GTF2A1LQ9UNN4 478 aa13.93□□□□□ -0.18
CLN6-212ENST00000636020 FAM90A10PA6NDY2 464 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 REG1BP48304 166 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 GNG10P50151 68 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 RASSF2P50749 326 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 PSME3P61289 254 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 SLC35D3Q5M8T2 416 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 BCL2L15Q5TBC7 163 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 BORCS8Q96FH0 119 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 OSBPL10Q9BXB5 764 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 PPIL3Q9H2H8 161 aaKnown RBP13.92□□□□□ -0.18
CLN6-212ENST00000636020 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 MOB1AQ9H8S9 216 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 LINC00574Q9H8X3 128 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 IDI2-AS1Q9NZ38 188 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 OR52A1Q9UKL2 312 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 GSTK1Q9Y2Q3 226 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 WSB1Q9Y6I7 421 aa13.92□□□□□ -0.18
CLN6-212ENST00000636020 IGHV4OR15-8A0A075B7B6 117 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 A0A087WW49 117 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 G3V318 75 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 CCL1P22362 96 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 SLC2A5P22732 501 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 F2RL1P55085 397 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 PPP1R8Q12972 351 aaKnown RBP13.91□□□□□ -0.18
CLN6-212ENST00000636020 GALEQ14376 348 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 CPOQ8IVL8 374 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 TMEM104Q8NE00 496 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 BBS1Q8NFJ9 593 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 OR8H1Q8NGG4 311 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 TTTY10Q9BZA0 68 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 KRT84Q9NSB2 600 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 CALYQ9NYX4 217 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 IKZF2Q9UKS7 526 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 COPS3Q9UNS2 423 aa13.91□□□□□ -0.18
CLN6-212ENST00000636020 MOSP00540 346 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 CD1BP29016 333 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 SLC16A12Q6ZSM3 486 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 ASB17Q8WXJ9 295 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 ST6GALNAC5Q9BVH7 336 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 COMMD4Q9H0A8 199 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.18
CLN6-212ENST00000636020 STUB1Q9UNE7 303 aa13.9□□□□□ -0.18
CLN6-212ENST00000636020 R4GMQ9 66 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms