RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 TMEM56Q96MV1 263 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 TMEM222Q9H0R3 208 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 ARV1Q9H2C2 271 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF581Q9P0T4 197 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
PTPN11-205ENST00000635625 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 TMEM56-RWDD3S4R434 201 aa10.62□□□□□ -0.71
PTPN11-205ENST00000635625 C3orf85A0A1B0GTC6 90 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 J3QT63 122 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 TUSC2O75896 110 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 CNOT4O95628 575 aaKnown RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 C9orf135Q5VTT2 229 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 FBXW12Q6X9E4 464 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 BHLHE23Q8NDY6 225 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 GLYATL2Q8WU03 294 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 NARS2Q96I59 477 aaKnown RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 RTL8AQ9BWD3 113 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 FGF23Q9GZV9 251 aaPredicted RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 FBXL17Q9UF56 701 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 AMDHD2Q9Y303 409 aa10.61□□□□□ -0.71
PTPN11-205ENST00000635625 LSM5Q9Y4Y9 91 aaKnown RBP10.61□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF503-AS2A6NEH8 195 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 NPIPB11E5RHQ5 1161 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 PHF1O43189 567 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 IL18BPO95998 194 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 MBPP02686 304 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 MMP9P14780 707 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 SELEP16581 610 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 PVALBP20472 110 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 KCNJ3P48549 501 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 RAB5CP51148 216 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 F2RL1P55085 397 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 TMEM33P57088 247 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 GNMTQ14749 295 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF169Q14929 603 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 SHEQ5VZ18 495 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 RPL7L1Q6DKI1 246 aaKnown RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 CMTM1Q8IZ96 169 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 NAXEQ8NCW5 288 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 OR4A4PQ8NGN8 299 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 MICU1Q9BPX6 476 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 NKX6-2Q9C056 277 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 OR2S2Q9NQN1 319 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 FAM212BQ9NTI7 297 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 MTCH1Q9NZJ7 389 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF629Q9UEG4 869 aaPredicted RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 POLDIP2Q9Y2S7 368 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 ASPMQ8IZT6 3477 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 WDFY3Q8IZQ1 3526 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 FAM221AA4D161 298 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 DEGS1O15121 323 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 KCNAB3O43448 404 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 IGHG3P01860 377 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 SEC11BP0C7V7 166 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 TUBG1P23258 451 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 CAV2P51636 162 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 DEFA5Q01523 94 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 TRIP6Q15654 476 aaKnown RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 GABRA6Q16445 453 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF880Q6PDB4 577 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 Q6ZPA2 131 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 OR4D5Q8NGN0 318 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 BOD1Q96IK1 185 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 TSNAXQ99598 290 aaKnown RBP10.6□□□□□ -0.71
PTPN11-205ENST00000635625 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 TUBG2Q9NRH3 451 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 PRSS50Q9UI38 385 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 LIPGQ9Y5X9 500 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 RTTNQ86VV8 2226 aa10.6□□□□□ -0.71
PTPN11-205ENST00000635625 CLEC18AA5D8T8 446 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 SCGB1D2O95969 90 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 NGFP01138 241 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 PRKACAP17612 351 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 WNT5AP41221 380 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 TNFSF10P50591 281 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
PTPN11-205ENST00000635625 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 MST1LQ2TV78 715 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 P4HA3Q7Z4N8 544 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 FOXRED2Q8IWF2 684 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 FAM58AQ8N1B3 248 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 CLEC18CQ8NCF0 446 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 NEK7Q8TDX7 302 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 GINS3Q9BRX5 216 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 OR51I2Q9H344 312 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 ZNF552Q9H707 407 aaPredicted RBP10.59□□□□□ -0.71
PTPN11-205ENST00000635625 SPRR3Q9UBC9 169 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 UBE2J1Q9Y385 318 aaPredicted RBP10.59□□□□□ -0.71
PTPN11-205ENST00000635625 STRAPQ9Y3F4 350 aaKnown RBP10.59□□□□□ -0.71
PTPN11-205ENST00000635625 CEP295Q9C0D2 2601 aa10.59□□□□□ -0.71
PTPN11-205ENST00000635625 ARGFXA6NJG6 315 aa10.58□□□□□ -0.72
PTPN11-205ENST00000635625 H0Y980 276 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms