RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RP2O75695 350 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 KDM4BO94953 1096 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 NXPH2O95156 264 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 HTR3BO95264 441 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 CSTBP04080 98 aaKnown RBP12.13□□□□□ -0.47
LINC00339-208ENST00000634934 SFTPBP07988 381 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 PAX1P15863 534 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 EGR1P18146 543 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 SERPINA2P20848 420 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 GLRA1P23415 457 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 CD80P33681 288 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 CFHR2P36980 270 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 SFRP4Q6FHJ7 346 aaPredicted RBP12.13□□□□□ -0.47
LINC00339-208ENST00000634934 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM229BQ8NBD8 167 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 OR51D1Q8NGF3 324 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 SUN5Q8TC36 379 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 CELSR1Q9NYQ6 3014 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 DYSFO75923 2080 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 A0A1W2PP11 408 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 LDLRAD4O15165 306 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 PPIHO43447 177 aaKnown RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 BPNT1O95861 308 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 LHBP01229 141 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 UBBP0CG47 229 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 RAB6AP20340 208 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 OPCMLQ14982 345 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 OR10K2Q6IF99 312 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 Q8IYB0 196 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 IZUMO1Q8IYV9 350 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 OR8H3Q8N146 312 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 EMG1Q92979 244 aaKnown RBP12.12□□□□□ -0.47
LINC00339-208ENST00000634934 NINJ1Q92982 152 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 FAM46BQ96A09 425 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 DNAJB11Q9UBS4 358 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 GHRLQ9UBU3 117 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 FBLN5Q9UBX5 448 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 ARID1AO14497 2285 aa12.12□□□□□ -0.47
LINC00339-208ENST00000634934 IGHV3OR15-7A0A075B7D8 119 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 MCRIP1C9JLW8 97 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 BET1O15155 118 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 SCGNO76038 276 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 CD74P04233 296 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 VSIG8P0DPA2 414 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PRKACAP17612 351 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PRSS3P35030 304 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PDLIM4P50479 330 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TSPAN5P62079 268 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 FAM58AQ8N1B3 248 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 OR4C16Q8NGL9 310 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 MBD6Q96DN6 1003 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 CST11Q9H112 138 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 BANF2Q9H503 90 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 RASL12Q9NYN1 266 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PPIAL4EA0A075B759 164 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PPIAL4DF5H284 164 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 H3BUI4 141 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 MPIG6BO95866 241 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 LPLP06858 475 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PPIAL4FP0DN26 164 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 GTF2F2P13984 249 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM33P57088 247 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TAS2R19P59542 299 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 SEC61A1P61619 476 aaKnown RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 SMIM21Q3B7S5 101 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 RNASE12Q5GAN4 147 aaKnown RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM104Q8NE00 496 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms