RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 MRPS18AQ9NVS2 196 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 AURKAIP1Q9NWT8 199 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 GMPPBQ9Y5P6 360 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 TSSC4Q9Y5U2 329 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 KBTBD11-OT1A0A1B0GTJ5 212 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM172BPA6NC97 362 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZFPL1O95159 310 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 FADS2O95864 444 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 AMY1AP04745 511 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 AMY2AP04746 511 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 HCKP08631 526 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 TMEM225BP0DP42 221 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 CD33P20138 364 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 CD24P25063 80 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 MNDAP41218 407 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 KCNJ3P48549 501 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 LOXL3P58215 753 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 SCN1BQ07699 218 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 RAB40BQ12829 278 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ATXN7L3Q14CW9 347 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 THNSL2Q86YJ6 484 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 CBR4Q8N4T8 237 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR9G1Q8NH87 305 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR5AK2Q8NH90 309 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 SGCDQ92629 289 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 KIRREL1Q96J84 757 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 Q96MT0 163 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 PPIL3Q9H2H8 161 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ISG20L2Q9H9L3 353 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ERVK13-1Q9NX77 482 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 AASSQ9UDR5 926 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 DHDHQ9UQ10 334 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-247ENST00000628347 TCRBV4S1A1TA0A5B7 111 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 H0YJX3 145 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 IL1AP01583 271 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 LPLP06858 475 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 PF4V1P10720 104 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 GBX2P52951 348 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 FOXB2Q5VYV0 432 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 ASCL4Q6XD76 172 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF565Q8N9K5 539 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR10A7Q8NGE5 316 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 CNIH3Q8TBE1 160 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 MYDGFQ969H8 173 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 C9orf16Q9BUW7 83 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 JAM3Q9BX67 310 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 CALYQ9NYX4 217 aa9.92□□□□□ -0.82
SOX2-OT-247ENST00000628347 TRAV24A0A0B4J272 114 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 E9PI62 339 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 J3QR06 171 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 GABRPO00591 440 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM106CPP0CH98 169 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 IGLL1P15814 213 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 RAB3AP20336 220 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 C21orf33P30042 268 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR3A4PP47883 348 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 PAN3Q58A45 887 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 UTF1Q5T230 341 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 SLC16A12Q6ZSM3 486 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 C10orf67Q8IYJ2 551 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR52I1Q8NGK6 324 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR13A1Q8NGR1 328 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 TSEN15Q8WW01 171 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 BARHL1Q9BZE3 327 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 IDI2-AS1Q9NZ38 188 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 KIF25Q9UIL4 384 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 MOB4Q9Y3A3 225 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 RPL36Q9Y3U8 105 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
SOX2-OT-247ENST00000628347 MEIKINA0A087WXM9 373 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 LOC100130705A0A1B0GUX0 176 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 MAGEB3O15480 346 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 DUS4LO95620 317 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 PF4P02776 101 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 NFYBP25208 207 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 GLP1RP43220 463 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 RAB7AP51149 207 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 SLC35A2P78381 396 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 RBM39Q14498 530 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 KLHL22Q53GT1 634 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 NHLRC3Q5JS37 347 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 LPCAT4Q643R3 524 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 CCDC121Q6ZUS5 278 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 OSR2Q8N2R0 312 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 TNFAIP8L1Q8WVP5 186 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 RGP1Q92546 391 aaPredicted RBP9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 TOMM40LQ969M1 308 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 RPEQ96AT9 228 aa9.9□□□□□ -0.82
SOX2-OT-247ENST00000628347 IFT22Q9H7X7 185 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms