RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 FAAP24Q9BTP7 215 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 SSBP3Q9BWW4 388 aaPredicted RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 PECRQ9BY49 303 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 SHARPINQ9H0F6 387 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 FAM234AQ9H0X4 552 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ABCG5Q9H222 651 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 MIXL1Q9H2W2 232 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 MMP27Q9H306 513 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 DIABLOQ9NR28 239 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 PLEKHJ1Q9NW61 149 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 RCC2Q9P258 522 aaKnown RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ADAM30Q9UKF2 790 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 YLPM1P49750 1951 aaKnown RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 TRAV18A0A075B6X5 111 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 A0A0A6YYH2 397 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 A6NJ64 397 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 H7C1Q1 480 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 RAB27BO00194 218 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 MGST3O14880 152 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 SCGNO76038 276 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 GNB3P16520 340 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 S100A5P33763 92 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 TALDO1P37837 337 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM50BP56557 158 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 EDDM3BP56851 147 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 LCN2P80188 198 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 AESQ08117 197 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 MADCAM1Q13477 382 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 KRBOX4Q5JUW0 171 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM69Q5SWH9 247 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 WDR25Q64LD2 544 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 OLFML2AQ68BL7 652 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 BTN2A1Q7KYR7 527 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 CIARTQ8N365 385 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 TPRX1Q8N7U7 411 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 OR4M1Q8NGD0 313 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 OR5D13Q8NGL4 314 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 PLPPR1Q8TBJ4 325 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 SULT4A1Q9BR01 284 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 NUDT16L1Q9BRJ7 211 aaKnown RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 ZMAT3Q9HA38 289 aaKnown RBP7.06□□□□□ -1.28
SGMS1-211ENST00000626236 LPAR2Q9HBW0 351 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 ETAA1Q9NY74 926 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 EXTL2Q9UBQ6 330 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 HSF4Q9ULV5 492 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 A3GALT2U3KPV4 340 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 OTOGQ6ZRI0 2925 aa7.06□□□□□ -1.28
SGMS1-211ENST00000626236 ITPR3Q14573 2671 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF469Q96JG9 3925 aaPredicted RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 ABCA2Q9BZC7 2435 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 MFNGO00587 321 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 XRCC3O43542 346 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 FOXH1O75593 365 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 CLPXO76031 633 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 CSN2P05814 226 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 GLAP06280 429 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 HIST1H1DP16402 221 aaKnown RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 ZFP36P26651 326 aaKnown RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 GLIPR1P48060 266 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 KCNJ3P48549 501 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 P2RX3P56373 397 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 TAS2R20P59543 309 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 CDNFQ49AH0 187 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 RSBN1Q5VWQ0 802 aaPredicted RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 CNIH2Q6PI25 160 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 COQ2Q96H96 371 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 DIRAS2Q96HU8 199 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 DCTN5Q9BTE1 182 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 CHMP1AQ9HD42 196 aaPredicted RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 PTTG2Q9NZH5 202 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 AK3Q9UIJ7 227 aa7.05□□□□□ -1.28
SGMS1-211ENST00000626236 ELF5Q9UKW6 265 aaPredicted RBP7.05□□□□□ -1.28
SGMS1-211ENST00000626236 LOC105371242A0A075B767 164 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 MEIKINA0A087WXM9 373 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 A0A1W2PQ09 198 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM30CPA0ZSE6 113 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 MEX3AA1L020 520 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 FUOMA2VDF0 154 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM235A6NFC5 223 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 A8MXK9 166 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 C22orf46C9J442 243 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ECDO95905 644 aaPredicted RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 GSTP1P09211 210 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 CD3GP09693 182 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 IGHV4-31P0DP07 118 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 PTHLHP12272 177 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ERP29P30040 261 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TNFSF8P32971 234 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 MNDAP41218 407 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 RPL31P62899 125 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 MRPS15P82914 257 aaKnown RBP7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ARFRP1Q13795 201 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ARL6IP1Q15041 203 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM249Q2WGJ8 235 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF260Q3ZCT1 412 aa7.04□□□□□ -1.28
SGMS1-211ENST00000626236 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms