RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ECSITQ9BQ95 431 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ALKBH7Q9BT30 221 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 TMEM43Q9BTV4 400 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OCR1Q9BZK8 76 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SLC19A3Q9BZV2 496 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RAB17Q9H0T7 212 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 FN3KRPQ9HA64 309 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 MEAF6Q9HAF1 191 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SIAEQ9HAT2 523 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RNPEPL1Q9HAU8 725 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 EDA2RQ9HAV5 297 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 BCL2L10Q9HD36 194 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 IL1RAPQ9NPH3 570 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 UFSP2Q9NUQ7 469 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SLC25A37Q9NYZ2 338 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PTTG3PQ9NZH4 202 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 CNOT2Q9NZN8 540 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PSMC3IPQ9P2W1 217 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 P2RX2Q9UBL9 471 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 BTNL2Q9UIR0 455 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SPATA2Q9UM82 520 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GPR132Q9UNW8 380 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 KPTNQ9Y664 436 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 HSPG2P98160 4391 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 TRAV18A0A075B6X5 111 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 A0A0U1RQV5 110 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 A0A1B0GVI7 797 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 LINC00854A0A1B0GVQ3 168 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RBMY1BA6NDE4 496 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RBMY1EA6NEQ0 496 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR6C6A6NF89 314 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 MFSD2BA6NFX1 497 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 H7C1C5 153 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 KPNA4O00629 521 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RNF13O43567 381 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CHP2O43745 196 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SYNGR1O43759 233 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ANGPTL7O43827 346 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 MTRF1O75570 445 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 FARS2O95363 451 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 PTHP01270 115 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CST2P09228 141 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RBMY1DP0C7P1 496 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 PSKH1P11801 424 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SERPINB5P36952 375 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 AQP2P41181 271 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CD200P41217 278 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CRATP43155 626 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CNN1P51911 297 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CRISP3P54108 245 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 NAA20P61599 178 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 LCN6P62502 163 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SLC35A2P78381 396 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 DHODHQ02127 395 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 EMX1Q04741 257 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CD300CQ08708 224 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 KIAA0141Q14154 515 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RGNQ15493 299 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SGCAQ16586 387 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 DUSP7Q16829 419 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 LRRC75BQ2VPJ9 315 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 KCTD21Q4G0X4 260 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 IFI44LQ53G44 452 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SLC25A30Q5SVS4 291 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 TEX36Q5VZQ5 186 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 C8orf74Q6P047 294 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 C1orf94Q6P1W5 598 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 DHRS4L2Q6PKH6 230 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SIGLEC15Q6ZMC9 328 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF621Q6ZSS3 439 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CCDC121Q6ZUS5 278 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 Q6ZVQ6 151 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SH2D6Q7Z4S9 175 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 DPPA2Q7Z7J5 298 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 LHFPL4Q7Z7J7 247 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF573Q86YE8 665 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 EIF1ADQ8N9N8 165 aaKnown RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR4C15Q8NGM1 316 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR6T1Q8NGN1 323 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR4C13Q8NGP0 309 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR9I1Q8NGQ6 314 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 C8orf46Q8TAG6 207 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 SLC7A13Q8TCU3 470 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ADAMTS16Q8TE57 1224 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 DNAJA4Q8WW22 397 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 MYDGFQ969H8 173 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 TSSK2Q96PF2 358 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RCHY1Q96PM5 261 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 OR52E6Q96RD3 313 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 GPR61Q9BZJ8 451 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 FGF23Q9GZV9 251 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 RMND5AQ9H871 391 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 TPT1P8Q9HAU6 139 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ELOVL3Q9HB03 270 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 ELL3Q9HB65 397 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-208ENST00000624953 CCNB1IP1Q9NPC3 277 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 POLE4Q9NR33 117 aa2.28□□□□□ -2.04
CDKL5-208ENST00000624953 AIG1Q9NVV5 245 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms