RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 UBE2V2Q15819 145 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 LIAT1Q6ZQX7 453 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 LRRC18Q8N456 261 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 TMEM54Q969K7 222 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 SPTSSAQ969W0 71 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 C18orf12Q96KH6 178 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 SF3B5Q9BWJ5 86 aaKnown RBP15.19■□□□□ 0.02
PCF11-207ENST00000624931 ZNF71Q9NQZ8 489 aaPredicted RBP15.19■□□□□ 0.02
PCF11-207ENST00000624931 UMAD1C9J7I0 102 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 AP4M1O00189 453 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 SYNGR4O95473 234 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 ABHD14BQ96IU4 210 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 TMPRSS5Q9H3S3 457 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 ELL3Q9HB65 397 aaPredicted RBP15.18■□□□□ 0.02
PCF11-207ENST00000624931 GSN-AS1Q9NRJ2 163 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 MCTS1Q9ULC4 181 aaKnown RBP15.18■□□□□ 0.02
PCF11-207ENST00000624931 PIGLQ9Y2B2 252 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 TMED3Q9Y3Q3 217 aa15.18■□□□□ 0.02
PCF11-207ENST00000624931 SCGB1D2O95969 90 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 PRH1P02810 166 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 TMEM225BP0DP42 221 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 ACKR3P25106 362 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 PLA2G5P39877 138 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 ZNF616Q08AN1 781 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 CLINT1Q14677 625 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 GNMTQ14749 295 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 CNN3Q15417 329 aaKnown RBP15.17■□□□□ 0.02
PCF11-207ENST00000624931 FAM185AQ8N0U4 392 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 RTN4IP1Q8WWV3 396 aaPredicted RBP15.17■□□□□ 0.02
PCF11-207ENST00000624931 ERGIC1Q969X5 290 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 SMIM3Q9BZL3 60 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 FAM87AP0C7U9 286 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 ZNF266Q14584 549 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 OR8B8Q15620 311 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 AKIRIN2Q53H80 203 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 KRBOX4Q5JUW0 171 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 ASCL4Q6XD76 172 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 AAED1Q7RTV5 226 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 C6orf201Q7Z4U5 140 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 OR5D18Q8NGL1 313 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 MAFIPQ8WZ33 124 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 ZNF837Q96EG3 531 aaPredicted RBP15.17■□□□□ 0.02
PCF11-207ENST00000624931 NIT2Q9NQR4 276 aa15.17■□□□□ 0.02
PCF11-207ENST00000624931 FOXD3Q9UJU5 478 aaPredicted RBP15.17■□□□□ 0.02
PCF11-207ENST00000624931 ZNF850A8MQ14 1090 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 GABRR1P24046 479 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 SULT1A1P50225 295 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 TUSC5Q8IXB3 177 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 C20orf196Q8IYI0 205 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 PRRG4Q9BZD6 226 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 ZNF391Q9UJN7 358 aa15.16■□□□□ 0.02
PCF11-207ENST00000624931 IGKV1D-8A0A087WSZ0 117 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 MED19A0JLT2 244 aaPredicted RBP15.15■□□□□ 0.02
PCF11-207ENST00000624931 CDS2O95674 445 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 FAHP16930 419 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 ENDOGQ14249 297 aaKnown RBP15.15■□□□□ 0.02
PCF11-207ENST00000624931 RSU1Q15404 277 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 FBXW12Q6X9E4 464 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 LHFPL2Q6ZUX7 228 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 ALKBH3Q96Q83 286 aaPredicted RBP15.15■□□□□ 0.02
PCF11-207ENST00000624931 CALHM2Q9HA72 323 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 ZNF286AQ9HBT8 521 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 CACNA1AO00555 2505 aa15.15■□□□□ 0.02
PCF11-207ENST00000624931 PHF3Q92576 2039 aaKnown RBP15.15■□□□□ 0.02
PCF11-207ENST00000624931 A0A1W2PPH5 198 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 A6NLC8 198 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 F5H5K5 113 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 M0R135 149 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 IGHV3-9P01782 118 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 OR5AC1P0C628 307 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 MTCP1P56278 107 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 SOHLH1Q5JUK2 328 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 UNQ6494/PRO21346Q6UXR6 183 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 SLC16A13Q7RTY0 426 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 ZNF565Q8N9K5 539 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 ZCCHC14Q8WYQ9 949 aaKnown RBP15.14■□□□□ 0.01
PCF11-207ENST00000624931 ZNF799Q96GE5 643 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 MARS2Q96GW9 593 aaKnown RBP15.14■□□□□ 0.01
PCF11-207ENST00000624931 SPIN2AQ99865 258 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 SPIN2BQ9BPZ2 258 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 ULBP2Q9BZM5 246 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 PRDM14Q9GZV8 571 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 BCO1Q9HAY6 547 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 WFDC1Q9HC57 220 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 IL36GQ9NZH8 169 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 CHD8Q9HCK8 2581 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 IGKV3D-15A0A087WSY6 115 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 LINC00587B1AMM8 73 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 K7N7A8 449 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 AQP7O14520 342 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 HSPA12AO43301 675 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 DHHO43323 396 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 GATCO43716 136 aaKnown RBP15.14■□□□□ 0.01
PCF11-207ENST00000624931 UCNP55089 124 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 POLR2GP62487 172 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCF11-207ENST00000624931 SUMF2Q8NBJ7 301 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 NPRL2Q8WTW4 380 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 MOB3AQ96BX8 217 aa15.14■□□□□ 0.01
PCF11-207ENST00000624931 SLC25A31Q9H0C2 315 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms