RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 DTX3Q8N9I9 347 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 OR10K1Q8NGX5 313 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 OR2T6Q8NHC8 308 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 NDNFQ8TB73 568 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 ZNF596Q8TC21 504 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 NR1H4Q96RI1 486 aaPredicted RBP11.96□□□□□ -0.49
LINC00643-206ENST00000623985 METTL9Q9H1A3 318 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.49
LINC00643-206ENST00000623985 TCF7L1Q9HCS4 588 aa11.96□□□□□ -0.49
LINC00643-206ENST00000623985 PAK1IP1Q9NWT1 392 aaPredicted RBP11.96□□□□□ -0.49
LINC00643-206ENST00000623985 TRAV24A0A0B4J272 114 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 HSPB6O14558 160 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 GPX5O75715 221 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 HTR3BO95264 441 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 CD1AP06126 327 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 HTR1DP28221 377 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 KIR2DS4P43632 304 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 EFNB2P52799 333 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
LINC00643-206ENST00000623985 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 BPIFB6Q8NFQ5 453 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 THRSPQ92748 146 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 TFAP2CQ92754 450 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 OR14A2Q96R54 314 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 S100A13Q99584 98 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF184Q99676 751 aaPredicted RBP11.95□□□□□ -0.5
LINC00643-206ENST00000623985 NKX3-1Q99801 234 aaPredicted RBP11.95□□□□□ -0.5
LINC00643-206ENST00000623985 NCOR1P1Q9H4R4 102 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 IFT22Q9H7X7 185 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 FKBP14Q9NWM8 211 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
LINC00643-206ENST00000623985 A0A087X0M5 115 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 TRBV5-7A0A0A0MS05 114 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 PNMA8CA0A1B0GUJ8 204 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 A0A1B0GX30 115 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 MEGF11A6BM72 1044 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 A6NDX4 124 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 F2RL2O00254 374 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF780AO75290 641 aaPredicted RBP11.94□□□□□ -0.5
LINC00643-206ENST00000623985 CDRT1O95170 752 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 CSTBP04080 98 aaKnown RBP11.94□□□□□ -0.5
LINC00643-206ENST00000623985 C21orf33P30042 268 aaPredicted RBP11.94□□□□□ -0.5
LINC00643-206ENST00000623985 GLP1RP43220 463 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 BDH1Q02338 343 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 SLC34A1Q06495 639 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 BAIAP2L2Q6UXY1 529 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 ORAI1Q96D31 301 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 ING3Q9NXR8 418 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
LINC00643-206ENST00000623985 PLXNB1O43157 2135 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 TRAV8-7A0A075B6U6 113 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 KBTBD11-OT1A0A1B0GTJ5 212 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MAGEA13PA6NCF6 341 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 SERPINA2P20848 420 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MAPK3P27361 379 aaPredicted RBP11.93□□□□□ -0.5
LINC00643-206ENST00000623985 GDNFP39905 211 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 RAB13P51153 203 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
LINC00643-206ENST00000623985 C17orf58Q2M2W7 97 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MPV17LQ2QL34 196 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 RSBN1Q5VWQ0 802 aaPredicted RBP11.93□□□□□ -0.5
LINC00643-206ENST00000623985 CCBE1Q6UXH8 406 aaPredicted RBP11.93□□□□□ -0.5
LINC00643-206ENST00000623985 TMEM219Q86XT9 240 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 NANOGP1Q8N7R0 232 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF565Q8N9K5 539 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 DERL3Q96Q80 235 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MND1Q9BWT6 205 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 BARHL1Q9BZE3 327 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MMP27Q9H306 513 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF286AQ9HBT8 521 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 PCDHB16Q9NRJ7 776 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 CALYQ9NYX4 217 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 DPM3Q9P2X0 92 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 NKX1-2Q9UD57 310 aaPredicted RBP11.93□□□□□ -0.5
LINC00643-206ENST00000623985 KIF25Q9UIL4 384 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 ING4Q9UNL4 249 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 FOXJ3Q9UPW0 622 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 ERGIC3Q9Y282 383 aa11.93□□□□□ -0.5
LINC00643-206ENST00000623985 MEIKINA0A087WXM9 373 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 OR7C1O76099 320 aaPredicted RBP11.92□□□□□ -0.5
LINC00643-206ENST00000623985 IL1AP01583 271 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 CDK1P06493 297 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 CGB3P0DN86 165 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 CGB7P0DN87 165 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 CELP19835 753 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 CEACAM3P40198 252 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 AQP4P55087 323 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 DOC2BQ14184 412 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 GPR176Q14439 515 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 C2orf68Q2NKX9 166 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 HLA-DRB5Q30154 266 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 RNLSQ5VYX0 342 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms