RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 FAM183AA6NL82 134 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 SCN2BO60939 215 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 INAFM2P0DMQ5 153 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 KDELR2P33947 212 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 ZNF83P51522 516 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 C1QTNF8P60827 252 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 SLAMF1Q13291 335 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 RBM48Q5RL73 367 aaKnown RBP2.59□□□□□ -1.99
CPNE3-213ENST00000622183 FAM162BQ5T6X4 162 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 NXNL2Q5VZ03 156 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 DGAT2L6Q6ZPD8 337 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 USP50Q70EL3 339 aaPredicted RBP2.59□□□□□ -1.99
CPNE3-213ENST00000622183 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 C2orf15Q8WU43 125 aaKnown RBP2.59□□□□□ -1.99
CPNE3-213ENST00000622183 PDCD6IPQ8WUM4 868 aaKnown RBP2.59□□□□□ -1.99
CPNE3-213ENST00000622183 FXYD5Q96DB9 178 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 FAAP24Q9BTP7 215 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 TAPBPLQ9BX59 468 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 SPZ1Q9BXG8 430 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 UCK1Q9HA47 277 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 TAS2R13Q9NYV9 303 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 ZNF492Q9P255 531 aa2.59□□□□□ -1.99
CPNE3-213ENST00000622183 C2orf16Q68DN1 1984 aa2.59□□□□□ -2
CPNE3-213ENST00000622183 TRAV8-2A0A0B4J237 113 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 K7ERS5 55 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 SULT1B1O43704 296 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
CPNE3-213ENST00000622183 GTF2F2P13984 249 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 IDO1P14902 403 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 ZNF3P17036 446 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 CNTFRP26992 372 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 RAB25P57735 213 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 ARPC4P59998 168 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 DR1Q01658 176 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 FMODQ06828 376 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 PMS2P3Q13401 168 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 LDLRAD2Q5SZI1 272 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 LCE3AQ5TA76 89 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 MARCH3Q86UD3 253 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 ZFP82Q8N141 532 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 GATD1Q8NB37 220 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 DDIT4LQ96D03 193 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 TRNT1Q96Q11 434 aaKnown RBP2.58□□□□□ -2
CPNE3-213ENST00000622183 ANGPTL4Q9BY76 406 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 ULBP1Q9BZM6 244 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 FKBP14Q9NWM8 211 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 POLR3AO14802 1390 aaPredicted RBP2.58□□□□□ -2
CPNE3-213ENST00000622183 KIAA0232Q92628 1395 aa2.58□□□□□ -2
CPNE3-213ENST00000622183 COL27A1Q8IZC6 1860 aaPredicted RBP2.58□□□□□ -2
CPNE3-213ENST00000622183 ADAMTSL3P82987 1691 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 IGKV1OR2-108A0A075B7D4 117 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 TRPC5OSA6NMA1 111 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 LEUTXA8MZ59 168 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 F5H5P2 479 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 ENTPD6O75354 484 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 NDUFS6O75380 124 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 LIMS3P0CW19 117 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 LIMS4P0CW20 117 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 MLNP12872 115 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 ZNF35P13682 527 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 SPNP16150 400 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 PYCR1P32322 319 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 HAAOP46952 286 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 BLVRAP53004 296 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 MAP3K7CLP57077 242 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 KRTAP10-10P60014 251 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 UBE2IP63279 158 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 BIKQ13323 160 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 SPCS2Q15005 226 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 COMTD1Q86VU5 262 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 RPRMLQ8N4K4 120 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 RNASEH2CQ8TDP1 164 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 ZNF721Q8TF20 911 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 BBS2Q9BXC9 721 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 UPF3BQ9BZI7 483 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 NSRP1Q9H0G5 558 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 TXNIPQ9H3M7 391 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 TAS2R1Q9NYW7 299 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 PRELID1Q9Y255 219 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 TRAPPC1Q9Y5R8 145 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 V9GYY5 206 aaPredicted RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 LRPPRCP42704 1394 aaKnown RBP2.57□□□□□ -2
CPNE3-213ENST00000622183 SVILO95425 2214 aa2.57□□□□□ -2
CPNE3-213ENST00000622183 H3BQ85 93 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 CYTH3O43739 400 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 RPSAP08865 295 aaKnown RBP2.56□□□□□ -2
CPNE3-213ENST00000622183 CBX5P45973 191 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 MRPS15P82914 257 aaKnown RBP2.56□□□□□ -2
CPNE3-213ENST00000622183 BCL2A1Q16548 175 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 RGS21Q2M5E4 152 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 CLEC20AQ6ZU45 233 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 CD302Q8IX05 232 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 PPWD1Q96BP3 646 aaKnown RBP2.56□□□□□ -2
CPNE3-213ENST00000622183 PYURFQ96I23 114 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 OR2V2Q96R30 315 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 RTBDNQ9BSG5 229 aaPredicted RBP2.56□□□□□ -2
CPNE3-213ENST00000622183 SHANK2-AS3Q9BTD1 123 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 PLA2G12AQ9BZM1 189 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 PSTPIP2Q9H939 334 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 UBAP1Q9NZ09 502 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms