RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CEACAM16Q2WEN9 425 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 KMT5CQ86Y97 462 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 CPNE4Q96A23 557 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-211ENST00000622020 WSB1Q9Y6I7 421 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 CXCL13O43927 109 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 CA11O75493 328 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 NR2C1P13056 603 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 CRYGSP22914 178 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 TMEM267Q0VDI3 215 aaPredicted RBP13.58□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF266Q14584 549 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 MPV17LQ2QL34 196 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 THNSL2Q86YJ6 484 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 ANGPTL4Q9BY76 406 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 CRIM1Q9NZV1 1036 aa13.58□□□□□ -0.23
NPHP4-211ENST00000622020 FOXD3Q9UJU5 478 aaPredicted RBP13.58□□□□□ -0.23
NPHP4-211ENST00000622020 A0A096LPE4 126 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 TRAV39A0A0B4J263 110 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 TRDCB7Z8K6 153 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 SELLP14151 372 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 SUCLG1P53597 346 aaKnown RBP13.58□□□□□ -0.24
NPHP4-211ENST00000622020 RAB11AP62491 216 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 ELOBQ15370 118 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 KIAA2026Q5HYC2 2103 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 AKR1C8PQ5T2L2 129 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 PRR18Q8N4B5 295 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 EXTL1Q92935 676 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 OR51B6Q9H340 312 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 FAM86C1Q9NVL1 165 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 C19orf25Q9UFG5 118 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-211ENST00000622020 SRP19P09132 144 aaKnown RBP13.58□□□□□ -0.24
NPHP4-211ENST00000622020 LIFP15018 202 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 DEFA6Q01524 100 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 LCN15Q6UWW0 184 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 LHFPL2Q6ZUX7 228 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 CMTM1Q8IZ96 169 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 PROK2Q9HC23 129 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 SEMA5BQ9P283 1151 aa13.58□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF729A6NN14 1252 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-211ENST00000622020 BCL3P20749 454 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 FUT3P21217 361 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 RBM11P57052 281 aaKnown RBP13.57□□□□□ -0.24
NPHP4-211ENST00000622020 RAB35Q15286 201 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 AAED1Q7RTV5 226 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 LRTM2Q8N967 370 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 RSG1Q9BU20 258 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 HSPA12AO43301 675 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 GPM6AP51674 278 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 MRPS34P82930 218 aaKnown RBP13.57□□□□□ -0.24
NPHP4-211ENST00000622020 ICAM4Q14773 271 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 CLEC12BQ2HXU8 276 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 HIST2H3PS2Q5TEC6 136 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF100Q8IYN0 542 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
NPHP4-211ENST00000622020 CARFQ8N187 725 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF488Q96MN9 340 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
NPHP4-211ENST00000622020 IGHV3-64DA0A0J9YX35 117 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 DKK1O94907 266 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 SCAF4O95104 1147 aaKnown RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 SRFP11831 508 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 RAB1AP62820 205 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 PCOLCEQ15113 449 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIKESHIQ53FT3 197 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 IL22RA1Q8N6P7 574 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 LFNGQ8NES3 379 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 RNASE11Q8TAA1 199 aaKnown RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 ABHD3Q8WU67 409 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 IL1F10Q8WWZ1 152 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 A0A1W2PR80 420 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HS3ST1O14792 307 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 RFPL3SP0C7P2 107 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HOXA5P20719 270 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 CARD18P57730 90 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 ZNF845Q96IR2 970 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 PRO1933Q9H354 126 aa13.56□□□□□ -0.24
NPHP4-211ENST00000622020 VSIRQ9H7M9 311 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms