RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SSX8Q7RTT4 187 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SMIM15Q7Z3B0 74 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 OR2T6Q8NHC8 308 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 DYRK2Q92630 601 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 HGDQ93099 445 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SFXN3Q9BWM7 321 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 PECRQ9BY49 303 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 ZNF236Q9UL36 1845 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 PLCE1Q9P212 2302 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 MYO9AB2RTY4 2548 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 ZNF724A8MTY0 619 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SPNP16150 400 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 OPRK1P41145 380 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 UBE2G1P62253 170 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SSX2Q16385 188 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 Q56UQ5 140 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SLC25A47Q6Q0C1 308 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 TMEM123Q8N131 208 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 C10orf35Q96D05 121 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SSX4O60224 188 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 CLN5O75503 358 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 KLF7O75840 302 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 TOX4O94842 621 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 IFI6P09912 130 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 CBR1P16152 277 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 PCMT1P22061 227 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 PRDX2P32119 198 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 RAB5BP61020 215 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 NAAAQ02083 359 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 OR2F1Q13607 317 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 FAM122CQ6P4D5 195 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ACOT7LQ6ZUV0 252 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 OR1K1Q8NGR3 316 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 SLC25A10Q9UBX3 287 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 AMMECR1Q9Y4X0 333 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 SIRT4Q9Y6E7 314 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 RLFQ13129 1914 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 IGLV1-36A0A0B4J1U3 117 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 SNRPGP15A8MWD9 76 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ONECUT2O95948 504 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 GYPAP02724 150 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 CT45A10P0DMU9 189 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 FPR2P25090 351 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 SUCLG1P53597 346 aaKnown RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 FLI1Q01543 452 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 EGR4Q05215 589 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 DHRS2Q13268 280 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 PPP1R1AQ13522 171 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 TNXAQ16473 311 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 MPV17LQ2QL34 196 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 HIST2H3PS2Q5TEC6 136 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 NSUN5P2Q63ZY6 315 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 TMUB2Q71RG4 321 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 PLEKHA2Q9HB19 425 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 AK3Q9UIJ7 227 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 WIPI2Q9Y4P8 454 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 DSPPQ9NZW4 1301 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 GOSR1O95249 250 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 PMELP40967 661 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 KIR3DL2P43630 455 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 TAS2R45P59539 299 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 CEBPEQ15744 281 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ADIRFQ15847 76 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 IGFBP7Q16270 282 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ACSM6Q6P461 480 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 MUC15Q8N387 334 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 GNPNAT1Q96EK6 184 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 NIPSNAP3BQ9BS92 247 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 MS4A7Q9GZW8 240 aaPredicted RBP8.03□□□□□ -1.12
GGA3-223ENST00000621870 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 RASL12Q9NYN1 266 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 ZNF835Q9Y2P0 537 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 LHFPL6Q9Y693 200 aa8.03□□□□□ -1.12
GGA3-223ENST00000621870 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 NDUFB6O95139 128 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 CLDN14O95500 239 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 TXNDC12O95881 172 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 OR5AC1P0C628 307 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 APELAP0DMC3 54 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 TOR2AQ5JU69 321 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 Q6ZT83 130 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 YIPF5Q969M3 257 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 CMTM3Q96MX0 182 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 MRPL22Q9NWU5 206 aaKnown RBP8.02□□□□□ -1.12
GGA3-223ENST00000621870 C1RLQ9NZP8 487 aa8.02□□□□□ -1.12
GGA3-223ENST00000621870 ZIC3O60481 467 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 RPS4Y1P22090 263 aaKnown RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 TMEM91Q6ZNR0 172 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 KLF14Q8TD94 323 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 GPX7Q96SL4 187 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 PIGMQ9H3S5 423 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 BARX1Q9HBU1 254 aaPredicted RBP8.02□□□□□ -1.13
GGA3-223ENST00000621870 THYN1Q9P016 225 aa8.02□□□□□ -1.13
GGA3-223ENST00000621870 PSME4Q14997 1843 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms