RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ZDBF2Q9HCK1 2354 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 A0A1W2PPV9 198 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ID1P41134 155 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 FOXL2P58012 376 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ETFDHQ16134 617 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 PIPOXQ9P0Z9 390 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 A0A0J9YW62 118 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 OR5A2Q8NGI9 324 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 BLNKQ8WV28 456 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SMIM7Q9BQ49 75 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 TRPM6Q9BX84 2022 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 PLPP2O43688 288 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 PF4P02776 101 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 LOXL3P58215 753 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 H3F3AP84243 136 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 GABRA6Q16445 453 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 CD300LDQ6UXZ3 194 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC25A42Q86VD7 318 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 RAB40CQ96S21 281 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ANGPTL4Q9BY76 406 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 DOK5Q9P104 306 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SHROOM3Q8TF72 1996 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 GFRA1P56159 465 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 C11orf87Q6NUJ2 197 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF519Q8TB69 540 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 GVINP1Q7Z2Y8 2422 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 AHCTF1Q8WYP5 2266 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 NTN1O95631 604 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 PF4V1P10720 104 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 GUCA2AQ02747 115 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 OR1L1Q8NH94 360 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 R3HDM4Q96D70 268 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 GPR27Q9NS67 375 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 SLC2A8Q9NY64 477 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 RASL12Q9NYN1 266 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 CACNG5Q9UF02 275 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 SLC38A11Q08AI6 406 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 C9orf62Q8N4C0 152 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 NHLRC2Q8NBF2 726 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 OR1B1Q8NGR6 318 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 FOXJ2Q9P0K8 574 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 A0A1W2PQM1 296 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 TGOLN2O43493 480 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 CSRP1P21291 193 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 ACP1P24666 158 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 PEBP1P30086 187 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 UCP2P55851 309 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF714Q96N38 554 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 P2RX4Q99571 388 aa8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 EXOGQ9Y2C4 368 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-211ENST00000621271 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 TRDCB7Z8K6 153 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 RNASEK-C17orf49H0YIS7 233 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 MMP7P09237 267 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 BCL3P20749 454 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 PMELP40967 661 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 SPINK9Q5DT21 86 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 MESTQ5EB52 335 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 FAM209AQ5JX71 171 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 HSD17B13Q7Z5P4 300 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF385AQ96PM9 386 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 TMPRSS13Q9BYE2 586 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 RAXQ9Y2V3 346 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 WIPI2Q9Y4P8 454 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 CDK5RAP2Q96SN8 1893 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 NDUFA2O43678 99 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 CA11O75493 328 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 NTF3P20783 257 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 PLPPR5Q32ZL2 321 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF770Q6IQ21 691 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 LRRTM1Q86UE6 522 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 LINC00052Q96N35 136 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 RHOFQ9HBH0 211 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 HILPDAQ9Y5L2 63 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 TMEM272A0A1B0GTI8 110 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 INSL4Q14641 139 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 RPUSD3Q6P087 351 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 OR5AP2Q8NGF4 316 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 RBM14Q96PK6 669 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 OR4C12Q96R67 309 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 WDR13Q9H1Z4 485 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 PARP11Q9NR21 331 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 FLRT3Q9NZU0 649 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 ZDHHC8Q9ULC8 765 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 VSIG4Q9Y279 399 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 TRBV5-3A0A0A0MS03 114 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 HMSDA8MTL9 139 aa8.57□□□□□ -1.04
CLTCL1-211ENST00000621271 TXNDC12O95881 172 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms