RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ZNF17P17021 662 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 OMGP23515 440 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 TSPAN7P41732 249 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 OR1D4P47884 311 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 BLKP51451 505 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 CLN3Q13286 438 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 PRTGQ2VWP7 1150 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 HLA-BQ31612 363 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 PHLDA2Q53GA4 152 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 NCR3LG1Q68D85 454 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 ASCL5Q7RTU5 278 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 RELTQ969Z4 430 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 NXT1Q9UKK6 140 aaKnown RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 IGKV1D-43A0A0B4J1Z2 117 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 TNFP01375 233 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 NPSP0C0P6 89 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 DYNLT3P51808 116 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 MRPS11P82912 194 aaKnown RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 POU3F1Q03052 451 aaPredicted RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
UPF3A-212ENST00000619079 IL24Q13007 206 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 TSPO2Q5TGU0 170 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 ZNF787Q6DD87 383 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 RTN4RQ9BZR6 473 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
UPF3A-212ENST00000619079 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 ZFP92A6NM28 416 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 PROB1E7EW31 1015 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 H7BYZ3 331 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 SSSCA1O60232 199 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 IFNA5P01569 189 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
UPF3A-212ENST00000619079 FXYD4P59646 89 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 COTL1Q14019 142 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 P2RY6Q15077 328 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 DEFB110Q30KQ9 67 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 MRGPRGQ86SM5 289 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 GBGT1Q8N5D6 347 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 OR51G1Q8NGK1 321 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 OR2V1Q8NHB1 315 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 DTD1Q8TEA8 209 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 TMEM234Q8WY98 164 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 PP6455Q8WZ26 134 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 CYYR1Q96J86 154 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 LIME1Q9H400 295 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 ELL3Q9HB65 397 aaPredicted RBP9.38□□□□□ -0.91
UPF3A-212ENST00000619079 ASCL3Q9NQ33 180 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 NAGKQ9UJ70 344 aa9.38□□□□□ -0.91
UPF3A-212ENST00000619079 TNFRSF10CO14798 259 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GFRA3O60609 400 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 MMP7P09237 267 aaPredicted RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GALR1P47211 349 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 HERV-K104P61576 105 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GRB2P62993 217 aaKnown RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 HIST1H3AP68431 136 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GABREP78334 506 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 TLE3Q04726 772 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 C1orf61Q13536 156 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 ARMC6Q6NXE6 501 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 PRR22Q8IZ63 422 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 IL22RA1Q8N6P7 574 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GPR119Q8TDV5 335 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 LMX1AQ8TE12 382 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 MBD3L1Q8WWY6 194 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 Q96M66 194 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GLRX2Q9NS18 164 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 GPR27Q9NS67 375 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 KLHL13Q9P2N7 655 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 ARID1BQ8NFD5 2236 aaPredicted RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 FAM221AA4D161 298 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 NKX2-6A6NCS4 301 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 HRASP01112 189 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 TYMSP04818 313 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 TUBG1P23258 451 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 RUNX1Q01196 453 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 TMEM241Q24JQ0 296 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 NKAIN1Q4KMZ8 207 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 HLA-DQA1Q5Y7H0 255 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 MEX3BQ6ZN04 569 aaKnown RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 ZNF705AQ6ZN79 300 aaPredicted RBP9.37□□□□□ -0.91
UPF3A-212ENST00000619079 C16orf82Q7Z2V1 217 aa9.37□□□□□ -0.91
UPF3A-212ENST00000619079 CENPVQ7Z7K6 275 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms