RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ATP23Q9Y6H3 246 aa6.08□□□□□ -1.44
SRGAP3-213ENST00000618999 SMCO3A2RU48 225 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 BTBD17A6NE02 478 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 C9JQL5 133 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 NPIPA2E9PIF3 369 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 NPIPA3F8WFD2 350 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 CYB5BO43169 146 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 NPIPB7O75200 414 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 NKX2-1P43699 371 aaPredicted RBP6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF84P51523 738 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 TMEM50BP56557 158 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 RPL23AP62750 156 aaKnown RBP6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 QRFPP83859 136 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 TAF9Q16594 264 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 GJC3Q8NFK1 279 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ERGIC1Q969X5 290 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 PLA2G3Q9NZ20 509 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ANXA10Q9UJ72 324 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 IGKV1D-43A0A0B4J1Z2 117 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A1W2PPE3 182 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 RBFOX3A6NFN3 312 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SEC14L6B5MCN3 397 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 FHITP49789 147 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 CLDN17P56750 224 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SSTP61278 116 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MYBPHQ13203 477 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MFAP5Q13361 173 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SPINK14Q6IE38 97 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 C1orf87Q8N0U7 546 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 OR5AS1Q8N127 324 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 OR2M3Q8NG83 312 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SCGB1C1Q8TD33 95 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MRGPRX4Q96LA9 322 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SSX3Q99909 188 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SMDT1Q9H4I9 107 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 STARD10Q9Y365 291 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A0A6YYD4 124 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MSTNO14793 375 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SRSF10O75494 262 aaKnown RBP6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MBPP02686 304 aaPredicted RBP6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 RAC2P15153 192 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ASCL1P50553 236 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 SSX2Q16385 188 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 RTN4RL2Q86UN3 420 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF429Q86V71 674 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 LRRC18Q8N456 261 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 TMEM217Q8N7C4 229 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF383Q8NA42 475 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 NTNG2Q96CW9 530 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 TVP23CQ96ET8 276 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 TREM2Q9NZC2 230 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 MPDZO75970 2070 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 FREM3P0C091 2139 aa6.07□□□□□ -1.44
SRGAP3-213ENST00000618999 WIPF3A6NGB9 483 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CRYM-AS1A6NIL9 109 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LIPT2A6NK58 231 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ZNF729A6NN14 1252 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 C22orf46C9J442 243 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 H3BQ15 152 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SLC33A1O00400 549 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ADAM10O14672 748 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LY86O95711 162 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 IFNA10P01566 189 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 OR8U8P0C7N1 319 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 MSR1P21757 451 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 TUBG1P23258 451 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PTGDSP41222 190 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CDX1P47902 265 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PCP4P48539 62 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SUCLG1P53597 346 aaKnown RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 Q3ZCU0 254 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 AADACL3Q5VUY0 350 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 OR2T2Q6IF00 324 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 YRDCQ86U90 279 aaKnown RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LHFPL1Q86WI0 220 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CPNE4Q96A23 557 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 GPR173Q9NS66 373 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 WSB1Q9Y6I7 421 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 COL5A1P20908 1838 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 NUP210LQ5VU65 1888 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 KMT2EQ8IZD2 1858 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 NKX2-8O15522 239 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 DHRS3O75911 302 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LIFP15018 202 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ALDH3B1P43353 468 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 PLPPR5Q32ZL2 321 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 TSPO2Q5TGU0 170 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 LYZL2Q7Z4W2 148 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CMTM1Q8IZ96 169 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SLC25A43Q8WUT9 341 aaPredicted RBP6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 SGK3Q96BR1 496 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 ANGPTL4Q9BY76 406 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 EGLN1Q9GZT9 426 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 BCO1Q9HAY6 547 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 TMED3Q9Y3Q3 217 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 A0A087WZY1 265 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 NPIPB13A6NJU9 1138 aa6.06□□□□□ -1.44
SRGAP3-213ENST00000618999 CEACAM18A8MTB9 384 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms