RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 TMEM25Q86YD3 366 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 CALHM2Q9HA72 323 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 OR51B4Q9Y5P0 310 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 FREM3P0C091 2139 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 LRRC3CA6NJW4 275 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 GNRHRP30968 328 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 SIGLECL1Q8N7X8 197 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 OR4F5Q8NH21 305 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 LYPD6BQ8NI32 183 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 WDR34Q96EX3 536 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 HDHD3Q9BSH5 251 aaPredicted RBP10.74□□□□□ -0.69
MATR3-227ENST00000618441 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
MATR3-227ENST00000618441 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 TMEM106BQ9NUM4 274 aa10.74□□□□□ -0.69
MATR3-227ENST00000618441 CHD9Q3L8U1 2897 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 B4DEV8 164 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 FGF17O60258 216 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 EGR1P18146 543 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 GGTLC2Q14390 218 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ASPHD2Q6ICH7 369 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 FAM89BQ8N5H3 189 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ST6GALNAC6Q969X2 333 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 MYO15AQ9UKN7 3530 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 MSTNO14793 375 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ABHD16AO95870 558 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CD1AP06126 327 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 FAM53BQ14153 422 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 OCIAD2Q56VL3 154 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CDC20BQ86Y33 519 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 NOXO1Q8NFA2 376 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 OR5AU1Q8NGC0 362 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 MRGPRDQ8TDS7 321 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ALG14Q96F25 216 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 RSG1Q9BU20 258 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ZNF703Q9H7S9 590 aaPredicted RBP10.73□□□□□ -0.69
MATR3-227ENST00000618441 Q9N2K0 584 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 LRP12Q9Y561 859 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 UNC13CQ8NB66 2214 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 NDUFB8O95169 186 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CCR2P41597 374 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 BATF2Q8N1L9 274 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 DTWD2Q8NBA8 298 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 PSMF1Q92530 271 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 ABHD6Q9BV23 337 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 FOXQ1Q9C009 403 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 CDH20Q9HBT6 801 aa10.73□□□□□ -0.69
MATR3-227ENST00000618441 APOBEC3BQ9UH17 382 aaKnown RBP10.73□□□□□ -0.69
MATR3-227ENST00000618441 UBE2J1Q9Y385 318 aaPredicted RBP10.73□□□□□ -0.69
MATR3-227ENST00000618441 FIGNL2A6NMB9 653 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 K7ERU9 68 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 CLEC3AO75596 197 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 RAD51DO75771 328 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 GLB1P16278 677 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 S100GP29377 79 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 CAPZBP47756 277 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 RRADP55042 308 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 RPL18Q07020 188 aaKnown RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 PCK2Q16822 640 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 FFAR4Q5NUL3 377 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 C9orf50Q5SZB4 431 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 KCNIP4Q6PIL6 250 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 TMEM45BQ96B21 275 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 SLC46A2Q9BY10 475 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 ZNF107Q9UII5 783 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 LOC105371242A0A075B767 164 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 MNX1P50219 401 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 RAB31Q13636 194 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 PHF19Q5T6S3 580 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 SLC22A24Q8N4F4 322 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 OR10G6Q8NH81 332 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 OTOSQ8NHW6 89 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 TMEM170AQ8WVE7 144 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 RBMXL1Q96E39 390 aaKnown RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 RBM24Q9BX46 236 aaKnown RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 GSX1Q9H4S2 264 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 TPRP12270 2363 aaKnown RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 SCN8AQ9UQD0 1980 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 DRD1P21728 446 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 CCNOP22674 350 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 NKX2-1P43699 371 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 OR3A4PP47883 348 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 SOX8P57073 446 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 PINX1Q96BK5 328 aaKnown RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
MATR3-227ENST00000618441 AICDAQ9GZX7 198 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms