RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 BCAT2O15382 392 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SOD2P04179 222 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 OR8G5Q8NG78 346 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 LRRC29Q8WV35 223 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 PTRH2Q9Y3E5 179 aaKnown RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 IGKV6D-41A0A0C4DH26 115 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 DHRS3O75911 302 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 PVRP15151 417 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 PSMB5P28074 263 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 TNFSF10P50591 281 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 P2RY4P51582 365 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 MRGPREQ86SM8 312 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 ZNF519Q8TB69 540 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 HCRTR1O43613 425 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 ICAM2P13598 275 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 PMELP40967 661 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 HSPB7Q9UBY9 170 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SERF2P84101 59 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SIGLEC14Q08ET2 396 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 ST6GALNAC3Q8NDV1 305 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 RPL18Q07020 188 aaKnown RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 OR4P4Q8NGL7 312 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 HSD17B10Q99714 261 aaKnown RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 WSB2Q9NYS7 404 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 KIR2DS5A0A0G2JLQ3 304 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 A0A0G2JNG1 304 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 KIR2DS3K7RE56 304 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 KIR2DS5Q14953 304 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 GBGT1Q8N5D6 347 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 TMEFF2Q9UIK5 374 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 GOSR1O95249 250 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 MEF2BQ02080 365 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 TIMM10BQ9Y5J6 103 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 CHST1O43916 411 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 AGAP20933 346 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 CKS2P33552 79 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 PLSCR4Q9NRQ2 329 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 LAMTOR2Q9Y2Q5 125 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 EMC6Q9BV81 110 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 ICOSLGO75144 302 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 GAPDHP04406 335 aaKnown RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 ORM2P19652 201 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 ORAI1Q96D31 301 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 P2RX4Q99571 388 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 H0YGG7 62 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 CEACAM6P40199 344 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 NHLRC3Q5JS37 347 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 SNRNP40Q96DI7 357 aaKnown RBP13.38□□□□□ -0.27
COL5A1-208ENST00000618395 SIGLEC11Q96RL6 698 aa13.38□□□□□ -0.27
COL5A1-208ENST00000618395 MVDP53602 400 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 FMODQ06828 376 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 C5orf30Q96GV9 206 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 SDF2Q99470 211 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 SPTA1P02549 2419 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 C1orf61Q13536 156 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 C20orf196Q8IYI0 205 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 RGRP47804 291 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 CSNK1DP48730 415 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 HDHD3Q9BSH5 251 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-208ENST00000618395 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 DYSFO75923 2080 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 ZNF660Q6AZW8 331 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-208ENST00000618395 ZG16BQ96DA0 208 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 CHODLQ9H9P2 273 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 WNK2Q9Y3S1 2297 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 TLCD2A6NGC4 264 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 RCC1P18754 421 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-208ENST00000618395 C12orf73Q69YU5 71 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 STXBP6Q8NFX7 210 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 TAAR3PQ9P1P4 343 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 TMEM30CPA0ZSE6 113 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 MEX3AA1L020 520 aaKnown RBP13.37□□□□□ -0.27
COL5A1-208ENST00000618395 GALNSP34059 522 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 INSL4Q14641 139 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 UBE2ZQ9H832 354 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-208ENST00000618395 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
COL5A1-208ENST00000618395 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 PFN3P60673 137 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 MMP17Q9ULZ9 603 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 C5orf49A4QMS7 147 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 IFITM2Q01629 132 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 EWSR1Q01844 656 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms