RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 KCNAB3O43448 404 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 C1QCP02747 245 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 FCARP24071 287 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 SERF2P84101 59 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 MRPL54Q6P161 138 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 ZAR1Q86SH2 424 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 FAM181AQ8N9Y4 354 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 LRRC3BQ96PB8 259 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 A0A1W2PPC1 479 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 CSN3P07498 182 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 SP1P08047 785 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 CTGFP29279 349 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 FZD5Q13467 585 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 C16orf82Q7Z2V1 217 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 KNTC1P50748 2209 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 HSPB1P04792 205 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 MGAT2Q10469 447 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 SGMS2Q8NHU3 365 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 SF3B6Q9Y3B4 125 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 MRPS18BQ9Y676 258 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 PQLC2LA1A4F0 135 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 BRS3P32247 399 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 CDX1P47902 265 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 PSG5Q15238 335 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 DPF1Q92782 380 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 HSD17B10Q99714 261 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 IL36GQ9NZH8 169 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 KCNK7Q9Y2U2 307 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 WASHC3Q9Y3C0 194 aa9.38□□□□□ -0.91
CLTCL1-209ENST00000617103 IGHV5-51A0A0C4DH38 117 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 RBP4P02753 201 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 PRSS1P07477 247 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 HOXC4P09017 264 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR1C1Q15619 314 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 DOCK2Q92608 1830 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 HELTA6NFD8 242 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 LIPT2A6NK58 231 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF205O95201 554 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 LIMS1P48059 325 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 TMEM50BP56557 158 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 TGIF2LXQ8IUE1 241 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR4P4Q8NGL7 312 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 SLC25A38Q96DW6 304 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 TBX21Q9UL17 535 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 A0A1W2PN81 502 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 FAM157CP0CG43 387 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 FSTP19883 344 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 KIR3DL2P43630 455 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 H2BFSP57053 126 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 TMEM240Q5SV17 173 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 BPIFA4PQ86YQ2 179 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR4S2Q8NH73 311 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 GPBAR1Q8TDU6 330 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 R3HDM4Q96D70 268 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 PGLYRP3Q96LB9 341 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 GPR132Q9UNW8 380 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2A4O95047 310 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 PATE4P0C8F1 98 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 SKP2Q13309 424 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF343Q6P1L6 599 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 SPNS3Q6ZMD2 512 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 VASH2Q86V25 355 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 KISS1RQ969F8 398 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 MRGPRFQ96AM1 343 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 ADTRPQ96IZ2 230 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2A7Q96R45 310 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 FAM60AQ9NP50 221 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 DOK5Q9P104 306 aa9.37□□□□□ -0.91
CLTCL1-209ENST00000617103 TRIP11Q15643 1979 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 CXorf65A6NEN9 183 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 RNPS1Q15287 305 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 Q5BKY6 102 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 OR2Z1Q8NG97 314 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 WNT2BQ93097 391 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 AQP10Q96PS8 301 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
CLTCL1-209ENST00000617103 SLX4Q8IY92 1834 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms