RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 EIF4E3Q8N5X7 224 aaKnown RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 STARD4Q96DR4 205 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 ADAT1Q9BUB4 502 aaKnown RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF71Q9NQZ8 489 aaPredicted RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 PROCRQ9UNN8 238 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 WDR1O75083 606 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 HERPUD1Q15011 391 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 FAM169BQ8N8A8 192 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 KLF14Q8TD94 323 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 INTS1Q8N201 2190 aaKnown RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 MSGN1A6NI15 193 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 DEGS1O15121 323 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 MPPED1O15442 326 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 KCNAB3O43448 404 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 PGA5P0DJD9 388 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 TPT1P13693 172 aaKnown RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF250P15622 560 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 SRPXP78539 464 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 ALKBH6Q3KRA9 238 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 SP6Q3SY56 376 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 CXorf67Q86X51 503 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 OR11L1Q8NGX0 322 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 LRRC20Q8TCA0 184 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 NRIP2Q9BQI9 281 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 DNTTIP1Q9H147 329 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 FBXO9Q9UK97 447 aaPredicted RBP13.37□□□□□ -0.27
NR1H3-235ENST00000616973 PCDHB10Q9UN67 800 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
NR1H3-235ENST00000616973 HSPB6O14558 160 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 TAAR5O14804 337 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 DEDDO75618 318 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 FGF2P09038 288 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 GNRHRP30968 328 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 S100A10P60903 97 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 EIF2S3LQ2VIR3 472 aaKnown RBP13.36□□□□□ -0.27
NR1H3-235ENST00000616973 BEND4Q6ZU67 534 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 SEM1Q6ZVN7 128 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 OR4A4PQ8NGN8 299 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 RDH5Q92781 318 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 BARX1Q9HBU1 254 aaPredicted RBP13.36□□□□□ -0.27
NR1H3-235ENST00000616973 ZFP57Q9NU63 452 aa13.36□□□□□ -0.27
NR1H3-235ENST00000616973 IGKV1-6A0A0C4DH72 117 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 C3orf85A0A1B0GTC6 90 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 A8MXK9 166 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 GPR31O00270 319 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 HS3ST1O14792 307 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 AGFG2O95081 481 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 MPV17P39210 176 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF154Q13106 437 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF146Q15072 292 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 OR8G1Q15617 311 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 FAM74A1Q5RGS3 127 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 C20orf204Q6ZNR8 217 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 BAP18Q8IXM2 172 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF565Q8N9K5 539 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 CABLES2Q9BTV7 478 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 BCL2L14Q9BZR8 327 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 TMEM100Q9NV29 134 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 PURGQ9UJV8 347 aaKnown RBP13.35□□□□□ -0.27
NR1H3-235ENST00000616973 AMDHD2Q9Y303 409 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 TMED3Q9Y3Q3 217 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-235ENST00000616973 BET1O15155 118 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 PHF1O43189 567 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-235ENST00000616973 CECR9P0C854 216 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 HKR1P10072 659 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF44P15621 663 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 KITLGP21583 273 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 ZP3P21754 424 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 IGFBP7Q16270 282 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 SPIN3Q5JUX0 258 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 MOB1BQ7L9L4 216 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-235ENST00000616973 LYZL2Q7Z4W2 148 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 GAPTQ8N292 157 aa13.35□□□□□ -0.27
NR1H3-235ENST00000616973 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-235ENST00000616973 CUL9Q8IWT3 2517 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
NR1H3-235ENST00000616973 OR5H1A6NKK0 313 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 NPIPB11E5RHQ5 1161 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 KLK10O43240 276 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 CRYABP02511 175 aaKnown RBP13.34□□□□□ -0.27
NR1H3-235ENST00000616973 SPINK2P20155 84 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
NR1H3-235ENST00000616973 BVESQ8NE79 360 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 TP53RKQ96S44 253 aa13.34□□□□□ -0.27
NR1H3-235ENST00000616973 LRFN3Q9BTN0 628 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms