RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 FAM90A9PA6NNJ1 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A12PA8MX19 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A5PA8MXJ8 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 H0YJX3 145 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 EI24O14681 340 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 SULT1B1O43704 296 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 ATP5HO75947 161 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 IGHV3-7P01780 117 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A15PP0C7V4 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A13PP0C7W8 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A14PP0C7W9 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A24PP0C7X0 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 DBTP11182 482 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 LHFPL3Q86UP9 236 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR51T1Q8NGJ9 327 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR13A1Q8NGR1 328 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 LEAP2Q969E1 77 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 TOMM40LQ969M1 308 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 RPEQ96AT9 228 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 ISG20L2Q9H9L3 353 aaKnown RBP16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 CALYQ9NYX4 217 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 ORC6Q9Y5N6 252 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 DYNC1I1O14576 645 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 CIB2O75838 187 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZFPL1O95159 310 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 DUS4LO95620 317 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 CLIC3O95833 236 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 SNRNP70P08621 437 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM106CPP0CH98 169 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 MTNR1BP49286 362 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 GALEQ14376 348 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 PAN3Q58A45 887 aaKnown RBP16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZNF691Q5VV52 312 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 LPCAT4Q643R3 524 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 SERPINA12Q8IW75 414 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 PARP16Q8N5Y8 322 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 LINC00482Q8N8I6 264 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR5D14Q8NGL3 314 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR56B4Q8NH76 319 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 NR1H4Q96RI1 486 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 KIF25Q9UIL4 384 aa16.48■□□□□ 0.23
TRAPPC3-208ENST00000616074 MEIKINA0A087WXM9 373 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 TRAV24A0A0B4J272 114 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 WI2-2373I1.2A0A1W2PRP0 233 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 PSMB11A5LHX3 300 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 SNTNA6NMZ2 147 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 J3QR06 171 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 DIAPH2-AS1Q14236 149 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZSCAN26Q16670 478 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 ELP2Q6IA86 826 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 ETV3LQ6ZN32 361 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZNF329Q86UD4 541 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 THNSL2Q86YJ6 484 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 SYS1Q8N2H4 156 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 CNIH3Q8TBE1 160 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 MRPL48Q96GC5 212 aaKnown RBP16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 PDCD1LG2Q9BQ51 273 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 PCDHB16Q9NRJ7 776 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 IDI2-AS1Q9NZ38 188 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 DHDHQ9UQ10 334 aa16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 AMMECR1Q9Y4X0 333 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC3-208ENST00000616074 A0A1W2PPI3 338 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 E9PI62 339 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 IL1AP01583 271 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 GABRB1P18505 474 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 HOXD3P31249 432 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 ALDH3A2P51648 485 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 LTC4SQ16873 150 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 DRAM1Q8N682 238 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZNF565Q8N9K5 539 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 PXT1Q8NFP0 134 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 TSEN15Q8WW01 171 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZNF649Q9BS31 505 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 PSG11Q9UQ72 335 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 NBEAL2Q6ZNJ1 2754 aa16.46■□□□□ 0.23
TRAPPC3-208ENST00000616074 TMEM212A6NML5 194 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 GABRPO00591 440 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 C21orf33P30042 268 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 EGFEM1PQ0D2K5 195 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 DEFB121Q5J5C9 76 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 VAX1Q5SQQ9 334 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 RSBN1Q5VWQ0 802 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 C11orf87Q6NUJ2 197 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 MRPL41Q8IXM3 137 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 C5orf56Q8N8D9 126 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 OR51A2Q8NGJ7 313 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 OR5AK2Q8NH90 309 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 PLPPR1Q8TBJ4 325 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 MRGPRDQ8TDS7 321 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 NOL4LQ96MY1 436 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 BARHL1Q9BZE3 327 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 NCOR1P1Q9H4R4 102 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 LINC00574Q9H8X3 128 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 RYR3Q15413 4870 aa16.45■□□□□ 0.22
TRAPPC3-208ENST00000616074 NPIPB11E5RHQ5 1161 aa16.44■□□□□ 0.22
TRAPPC3-208ENST00000616074 H3BNX3 289 aa16.44■□□□□ 0.22
TRAPPC3-208ENST00000616074 TMEM11P17152 192 aa16.44■□□□□ 0.22
TRAPPC3-208ENST00000616074 SSTR5P35346 364 aa16.44■□□□□ 0.22
TRAPPC3-208ENST00000616074 GNG10P50151 68 aa16.44■□□□□ 0.22
TRAPPC3-208ENST00000616074 RPL23AP62750 156 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms