RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 AK3Q9UIJ7 227 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TRAV30A0A087WSZ9 112 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 LOC390937A0A1W2PQ73 354 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SSX4O60224 188 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 NXPH3O95157 252 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SFT2D2O95562 160 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 PF4P02776 101 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 IAPPP10997 89 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 FGF12P61328 243 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 NHLH1Q02575 133 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM186Q96B77 213 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 DEFB108AA8MXU0 73 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 C1orf196B1AJZ1 125 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 HAX1O00165 279 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TM4SF5O14894 197 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 MT-ND4LP03901 98 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 NQO2P16083 231 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPL12P30050 165 aaKnown RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR5I1Q13606 314 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 PERPQ96FX8 193 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 WDYHV1Q96HA8 205 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAAP24Q9BTP7 215 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 CHODLQ9H9P2 273 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 CSAG2Q9Y5P2 127 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 DSPPQ9NZW4 1301 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TGOLN2O43493 480 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SYNGR1O43759 233 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 GCSHP23434 173 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 HSD17B13Q7Z5P4 300 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SKA3Q8IX90 412 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 NIPSNAP3BQ9BS92 247 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SRXN1Q9BYN0 137 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPS10P5Q9NQ39 176 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF835Q9Y2P0 537 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGLV3-32A0A0A0MS00 114 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 M0QZK8 103 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 FBXO24O75426 580 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TIAF1O95411 115 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 OPCMLQ14982 345 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SEZ6L2Q6UXD5 910 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 STPG3Q8N7X2 389 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZFP62Q8NB50 900 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 STXBP6Q8NFX7 210 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 SSC4DQ8WTU2 575 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 BCL2L2Q92843 193 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 C11orf54Q9H0W9 315 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 COL4A6Q14031 1691 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 HTR1DP28221 377 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 ELLP55199 621 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 HLXQ14774 488 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 C4orf17Q53FE4 359 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 THSD4Q6ZMP0 1018 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 C17orf82Q86X59 251 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZG16BQ96DA0 208 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 SH2D2AQ9NP31 389 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 MPZL1O95297 269 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 HPRT1P00492 218 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 RHOBP62745 196 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 SVBPQ8N300 66 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 YIPF5Q969M3 257 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 SIGLEC12Q96PQ1 595 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 DCTN5Q9BTE1 182 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 C20orf24Q9BUV8 137 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLEC7AQ9BXN2 247 aa8.46□□□□□ -1.05
TNFRSF9-204ENST00000615230 CDC42EP2O14613 210 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 CHEK1O14757 476 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 CTAG2O75638 210 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 CD3DP04234 171 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 UMODP07911 640 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 DGCR2P98153 550 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 RBPMS2Q6ZRY4 209 aaKnown RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 PRSS45Q7RTY3 260 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 ZNF552Q9H707 407 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 MED9Q9NWA0 146 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 TMEFF2Q9UIK5 374 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 OR2W1Q9Y3N9 320 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 ZFPL1O95159 310 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 PF4V1P10720 104 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 PJVKQ0ZLH3 352 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 MMDQ15546 238 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 BTNL8Q6UX41 500 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 OR9G1Q8NH87 305 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 SEC22AQ96IW7 307 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 HARBI1Q96MB7 349 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 TMUB1Q9BVT8 246 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 HRH4Q9H3N8 390 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 MRPS18AQ9NVS2 196 aaKnown RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 PTPRFP10586 1907 aa8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 MYO18AQ92614 2054 aaKnown RBP8.46□□□□□ -1.06
TNFRSF9-204ENST00000615230 RFPL4AA6NLU0 287 aa8.45□□□□□ -1.06
TNFRSF9-204ENST00000615230 TMEM229AB2RXF0 380 aa8.45□□□□□ -1.06
TNFRSF9-204ENST00000615230 RFPL4AL1F8VTS6 287 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms