RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 CBLN3Q6UW01 205 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 DNM1P46Q6ZS02 220 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 C9orf40Q8IXQ3 194 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 RFLNBQ8N5W9 214 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 TSTD1Q8NFU3 115 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 OR9K2Q8NGE7 335 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 LMX1AQ8TE12 382 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 FRZBQ92765 325 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 TSLPQ969D9 159 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 ZNF524Q96C55 264 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 PIK3IP1Q96FE7 263 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 MRAP2Q96G30 205 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 GUCD1Q96NT3 240 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 SIGMAR1Q99720 223 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 NUDT9Q9BW91 350 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 PHF7Q9BWX1 381 aaPredicted RBP5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 NXF5Q9H1B4 397 aaKnown RBP5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 SMDT1Q9H4I9 107 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 TMEM38BQ9NVV0 291 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 CDC42EP3Q9UKI2 254 aa5.85□□□□□ -1.47
CDKAL1-204ENST00000613575 CHD3Q12873 2000 aaKnown RBP5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PPIAL4EA0A075B759 164 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 TRAV14DV4A0A0A6YYC5 116 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 TRAV25A0A0B4J276 109 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PPIAL4CA0A0B4J2A2 164 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 TRBV5-5A0A0J9YX44 114 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 IFITM5A6NNB3 132 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PPIAL4DF5H284 164 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 DCTN6O00399 190 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 NPIPB7O75200 414 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 RAD51DO75771 328 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 GLSO94925 669 aaPredicted RBP5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 ABHD16AO95870 558 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PPIAL4FP0DN26 164 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 ALOX5APP20292 161 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 GFERP55789 205 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 NXPH1P58417 271 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 SLC35A1P78382 337 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 ALG10Q5BKT4 473 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PRAMEF17Q5VTA0 474 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 SFRP4Q6FHJ7 346 aaPredicted RBP5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 RTL6Q6ICC9 239 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 BTNL8Q6UX41 500 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 CDC20BQ86Y33 519 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 IZUMO1Q8IYV9 350 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 ZNF441Q8N8Z8 693 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 OR10G3Q8NGC4 313 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 GPX8Q8TED1 209 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 C15orf40Q8WUR7 153 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 SECTM1Q8WVN6 248 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 RAB40AQ8WXH6 277 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 FAM46BQ96A09 425 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 RAX2Q96IS3 184 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 LOXL4Q96JB6 756 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 FER1L6-AS2Q96M78 137 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 Q96M85 177 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 GFI1Q99684 422 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 PLK3Q9H4B4 646 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 FGF21Q9NSA1 209 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 MTCH1Q9NZJ7 389 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 OR6C3Q9NZP0 311 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 CLN8Q9UBY8 286 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 NAT8Q9UHE5 227 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 FBXO4Q9UKT5 387 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 UBE2J1Q9Y385 318 aaPredicted RBP5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 ATP23Q9Y6H3 246 aa5.84□□□□□ -1.47
CDKAL1-204ENST00000613575 LRP4O75096 1905 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 FAM230AA0A1W2PPH8 454 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PRR32B1ATL7 298 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 TMEM150CB9EJG8 249 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 GABARAPH6UMI1 98 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 K7EPK0 472 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PDE6DO43924 150 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 BGLAPP02818 100 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 FAM157CP0CG43 387 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PPIAL4GP0DN37 164 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 ESDP10768 282 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 CSRP1P21291 193 aaKnown RBP5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 EDNRAP25101 427 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 SSTR5P35346 364 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 GABRA2P47869 451 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 NANOS3P60323 173 aaKnown RBP5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 CTXN1P60606 82 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 DGCR2P98153 550 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 CFHR1Q03591 330 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PRDX4Q13162 271 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 TMEM177Q53S58 311 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 PHYHD1Q5SRE7 291 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 CCDC144NLQ6NUI1 221 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 LEG1Q6P5S2 330 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 COX15Q7KZN9 410 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 FAM71E2Q8N5Q1 922 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 STPG4Q8N801 248 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 OR4D9Q8NGE8 314 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 OR51L1Q8NGJ5 315 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 OR13C9Q8NGT0 318 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 ZPLD1Q8TCW7 415 aa5.83□□□□□ -1.48
CDKAL1-204ENST00000613575 ABHD5Q8WTS1 349 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms