RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ZNF728P0DKX0 622 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 PRTN3P24158 256 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 FPR2P25090 351 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 DLX6P56179 175 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 CLDN12P56749 244 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 SCGB2A2Q13296 93 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 UNC119Q13432 240 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 C2orf76Q3KRA6 126 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 HES5Q5TA89 166 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 TPRA1Q86W33 373 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 NR2C2APQ86WQ0 139 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 PDZD9Q8IXQ8 264 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 BCL6BQ8N143 479 aaPredicted RBP13.62□□□□□ -0.23
IRF1-211ENST00000613424 OR51D1Q8NGF3 324 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 FAM3DQ96BQ1 224 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 CENPOQ9BU64 300 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 BARHL1Q9BZE3 327 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 MS4A7Q9GZW8 240 aaPredicted RBP13.62□□□□□ -0.23
IRF1-211ENST00000613424 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
IRF1-211ENST00000613424 STEAP1Q9UHE8 339 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 SOX21Q9Y651 276 aaPredicted RBP13.62□□□□□ -0.23
IRF1-211ENST00000613424 LINC00312Q9Y6C7 94 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 JMJD1CQ15652 2540 aa13.62□□□□□ -0.23
IRF1-211ENST00000613424 SMIM30A4D0T7 59 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 IFITM5A6NNB3 132 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 C17orf98A8MV24 154 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 RNASEK-C17orf49H0YIS7 233 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 KCNJ3P48549 501 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 RPS27AP62979 156 aaKnown RBP13.61□□□□□ -0.23
IRF1-211ENST00000613424 SIGIRRQ6IA17 410 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 BRD3OSQ6XYD6 125 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 CORO2AQ92828 525 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 ZNF714Q96N38 554 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 TMEM59Q9BXS4 323 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 MRPS26Q9BYN8 205 aaKnown RBP13.61□□□□□ -0.23
IRF1-211ENST00000613424 OCEL1Q9H607 264 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 SPACA1Q9HBV2 294 aa13.61□□□□□ -0.23
IRF1-211ENST00000613424 RCC2Q9P258 522 aaKnown RBP13.61□□□□□ -0.23
IRF1-211ENST00000613424 IGHV1-69DA0A0B4J2H0 117 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 hCG_1809904A0A1W2PP81 198 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 A0A1W2PPE2 198 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 A0A1W2PR64 198 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 A0A1W2PRV1 198 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 ODAMA1E959 279 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 AIREO43918 545 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 IGHV1-69P01742 117 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 SDC2P34741 201 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 RANBP1P43487 201 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 BPIFB3P59826 476 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 KLRD1Q13241 179 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 TIMM50Q3ZCQ8 353 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 RSBN1Q5VWQ0 802 aaPredicted RBP13.6□□□□□ -0.23
IRF1-211ENST00000613424 RUSC1-AS1Q66K80 236 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 C9orf139Q6ZV77 190 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 OR2W3Q7Z3T1 314 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 TRAPPC6BQ86SZ2 158 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 SLC6A7Q99884 636 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 TM2D1Q9BX74 207 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 NCOR1P1Q9H4R4 102 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 KIF25Q9UIL4 384 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 UBE2J1Q9Y385 318 aaPredicted RBP13.6□□□□□ -0.23
IRF1-211ENST00000613424 PEX16Q9Y5Y5 336 aa13.6□□□□□ -0.23
IRF1-211ENST00000613424 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 NOTOA8MTQ0 251 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 MCRIP1C9JLW8 97 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 AIPO00170 330 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 CLEC2LP0C7M8 214 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 FUT3P21217 361 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 CFPP27918 469 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 PAX5Q02548 391 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 MXD1Q05195 221 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 TUSC1Q2TAM9 212 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 KIAA2026Q5HYC2 2103 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 NCR3LG1Q68D85 454 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 SLC35E4Q6ICL7 350 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 RAB12Q6IQ22 244 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 HCP5Q6MZN7 132 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 NICN1Q9BSH3 213 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 LPAR5Q9H1C0 372 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 TAS2R3Q9NYW6 316 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 FBLN5Q9UBX5 448 aa13.59□□□□□ -0.23
IRF1-211ENST00000613424 MEIKINA0A087WXM9 373 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 A0A0A6YYD4 124 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 TMEM272A0A1B0GTI8 110 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 H3BUI4 141 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 LDLRAD4O15165 306 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 PDCD6O75340 191 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 RBP4P02753 201 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 GLAP06280 429 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 SLC2A2P11168 524 aaPredicted RBP13.58□□□□□ -0.24
IRF1-211ENST00000613424 UBE2E1P51965 193 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 LSM3P62310 102 aaKnown RBP13.58□□□□□ -0.24
IRF1-211ENST00000613424 GUCA2AQ02747 115 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 PLA2G7Q13093 441 aa13.58□□□□□ -0.24
IRF1-211ENST00000613424 RBM39Q14498 530 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms